DPGLEAN06395 in OGS1.0

New model in OGS2.0DPOGS212387 
Genomic Positionscaffold219:+ 49685-50738
See gene structure
CDS Length663
Paired RNAseq reads  402
Single RNAseq reads  989
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012118 (9e-91)
Best Drosophila hit  sans fille (8e-72)
Best Human hitU2 small nuclear ribonucleoprotein B'' (2e-67)
Best NR hit (blastp)  U1 small nuclear ribonucleoprotein A [Apis mellifera] (1e-94)
Best NR hit (blastx)  AGAP011637-PA [Anopheles gambiae str. PEST] (6e-81)
GeneOntology terms


















  
GO:0048477 oogenesis
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0030532 small nuclear ribonucleoprotein complex
GO:0005681 spliceosomal complex
GO:0019099 female germ-line sex determination
GO:0005692 U11 snRNP
GO:0030619 U1 snRNA binding
GO:0003729 mRNA binding
GO:0005634 nucleus
GO:0007539 primary sex determination, soma
GO:0008380 RNA splicing
GO:0005685 U1 snRNP
GO:0005686 U2 snRNP
GO:0003676 nucleic acid binding
GO:0000166 nucleotide binding
GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0005515 protein binding
GO:0043234 protein complex
GO:0071011 precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome
InterPro families
  
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding, alpha-beta plait
Orthology groupMCL12246

Nucleotide sequence:

ATGGACATACGGCCGAACCACACAATATATATAAACAATCTCAATGAAAAAATTAAGAAG
GAGGAACTTAAAAAGTCCCTCTATGCTATATTTTCTCAATTTGGGCAGATTTTAGAAATC
GTTGCACTGAAAACACTCAAGATGAGGGGTCAAGCATTTGTTATATTCAAAGAAATATCC
AGTGCAACCGTCGCTTTGAGGAGTATGCAAGGATTCCCATTTTATGACAAACCTATGAGA
ATACAGTATTGTAAAACTGATAGTGATGTTATAGCAAAGATGAAGGGAACCTTCCAAGAA
CGACCTAAAAGACCAAAACTGCCAAAAGGTTCCGATGAGAAGAAGAAAAAGAACAAAGAT
CCCAATAGACCAAATGTGCCTGGATTTGGACAACCAAGTGTTCTTAACAATGTTAACGCT
GAACAGCCACCAAACCAAATACTGTTTCTTACTAATCTTCCTGATGAAACATCAGAAATG
ATGTTATCTATGTTGTTTAACCAGTTCCCTGGTTTTAAGGAAGTTCGACTGGTGCCAAAC
AGACATGATATCGCCTTTGTGGAGTTTGCTAATGAAATGCAATCAGCGGCTGCTAAAGAA
GCCCTCCAAGGCTTCAAGATCACTCCCACTCATGCTATGAAAATATCATTTGCAAAGAAA
TAG

Protein sequence:

MDIRPNHTIYINNLNEKIKKEELKKSLYAIFSQFGQILEIVALKTLKMRGQAFVIFKEIS
SATVALRSMQGFPFYDKPMRIQYCKTDSDVIAKMKGTFQERPKRPKLPKGSDEKKKKNKD
PNRPNVPGFGQPSVLNNVNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVPN
RHDIAFVEFANEMQSAAAKEALQGFKITPTHAMKISFAKK