| New model in OGS2.0 | DPOGS210347 |
|---|---|
| Genomic Position | scaffold1468:- 17821-20276 |
| See gene structure | |
| CDS Length | 1314 |
| Paired RNAseq reads | 13 |
| Single RNAseq reads | 39 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011984 (2e-146) |
| Best Drosophila hit | CG1640, isoform F (9e-117) |
| Best Human hit | alanine aminotransferase 1 (9e-107) |
| Best NR hit (blastp) | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (8e-135) |
| Best NR hit (blastx) | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (3e-130) |
| GeneOntology terms | GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity GO:0009058 biosynthetic process GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR004839 Aminotransferase, class I/classII IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
| Orthology group | MCL40699 |
Nucleotide sequence:
ATGAAGATAGAGAAATCTCTCAACGAAGACAACATGAACCAGCGTCTCCTGAAGATACAT
TATGCGGTTCGCGGACCCATCCTGGAGCGAGCCCTGGCCATACAGACGGACCTCAACGAG
GGTGTACTGAAGCCATTTAAGCGTGTAATCCGAGCAAACATCGGTGACTGTCACGCTCTG
GGTCAAAGACCGATAACTTTCATCAGACAAGTGTTGGCATTGGCGACCTGTCCTGGTCTC
CGGAGTTTACAAAACATACCCGAGGATGTAAAGGAACGAGTCAGAGAAATCCTAGGAGAG
TGCGTGAGTGGATCAGTGGGATCGTATTCACCAGCTCCAGGACTCCTGTTAATTCGTAAG
CACGTTGCTCAATACCTGACCGCCCGTGATGGTGTGGCCGCCAACTTTAATAACATATAC
CTCGGCTCGGGAGCTTCCGATCTCATCAAAAGTGTTCTCACCCTTTTTGTGGAAAAAGTC
GATGGAAAACCACCAGGTGTTATGATACCCATTCCCCAGTATCCATTATTTTCGGGGACC
CTCTCGGAGTTGGGACTGCAGCAGGTGGACTACTATTTAGACGAAGATGACGGCTGGGTT
CTGAAGTACGAAGAGTTGGAGCGGAGCTGGCGAGCAGCGAGCGAACACTGTAGCGTGCGA
GCAATAGTCGTCATTAATCCTGGGAACCCAACGGGACAGGTGATGCATGAGATGGGCGAT
CCATTTAAGAAGCTGCAGTTGTCTTCGTTCATGACGTGTTCCAAGGGCTGGGCTGCGGAG
TGCGGTCTACGAGCCGGCGTTTTGGAGCTCGTGTCTCTAGAGCCTCGAGTGATCTCCGCC
CTGGAGGCGGCGCGGTCGACTCAGCAGTGTGCCAGTGTGCTCGGACAGTGTGTTGTGGAC
TGCGTGATGCGTCCTCCGACTCCAGGTTCTCCGTCGTTTTCTCTCTTCTCTTCTGAACGT
GATCGCCTGAGGCGCGCTCTCAGTGAACGAGCCTTCGCGGCTCACACAGCTTTCAACTCC
ATTCCGGGTTACTTCTGTAACCCTATCGAAGGTGCAATGTTTGCATTTCCACGCATTGAA
ATACCGGGAAAAGCAAAACAGGAGGCCGCTGAGAGGGGTTTGGTTCCTGATGAATTTTAC
TGTCTACGACTGCTCGAAGAAACAGGAGTATGCGTGGTGCCCGGATCAGGGTTCGGTCAG
CGCCCCGGCTCTTACCATTTTCGAACCACCATTCTTCACGACAAAGACGAATTTAGCTAC
ATGTTAGCGTGCATACGACGGTTCCATTTAAACTTTATTGAGGAATATTCATAA
Protein sequence:
MKIEKSLNEDNMNQRLLKIHYAVRGPILERALAIQTDLNEGVLKPFKRVIRANIGDCHAL
GQRPITFIRQVLALATCPGLRSLQNIPEDVKERVREILGECVSGSVGSYSPAPGLLLIRK
HVAQYLTARDGVAANFNNIYLGSGASDLIKSVLTLFVEKVDGKPPGVMIPIPQYPLFSGT
LSELGLQQVDYYLDEDDGWVLKYEELERSWRAASEHCSVRAIVVINPGNPTGQVMHEMGD
PFKKLQLSSFMTCSKGWAAECGLRAGVLELVSLEPRVISALEAARSTQQCASVLGQCVVD
CVMRPPTPGSPSFSLFSSERDRLRRALSERAFAAHTAFNSIPGYFCNPIEGAMFAFPRIE
IPGKAKQEAAERGLVPDEFYCLRLLEETGVCVVPGSGFGQRPGSYHFRTTILHDKDEFSY
MLACIRRFHLNFIEEYS