New model in OGS2.0 | DPOGS210350  |
---|---|
Genomic Position | scaffold1468:+ 52768-56865 |
See gene structure | |
CDS Length | 1434 |
Paired RNAseq reads   | 193 |
Single RNAseq reads   | 576 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011983 (2e-157) |
Best Drosophila hit   | CG1640, isoform F (3e-148) |
Best Human hit | alanine aminotransferase 2 isoform 1 (5e-140) |
Best NR hit (blastp)   | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (2e-171) |
Best NR hit (blastx)   | PREDICTED: similar to alanine aminotransferase [Acyrthosiphon pisum] (1e-165) |
GeneOntology terms    | GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity GO:0009058 biosynthetic process GO:0030170 pyridoxal phosphate binding |
InterPro families    | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR004839 Aminotransferase, class I/classII IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR001176 1-aminocyclopropane-1-carboxylate synthase |
Orthology group | MCL10566 |
Nucleotide sequence:
ATGGCATCGATGACATTGAAAAATATCAACCCGAACATACTCAAGGTGGAGTACGCTGTT
CAAGGTCCCTTAGTGGCTCGAGCTGGTGAAATAGAAGAAGAATTAAAAAGGGGAGTAGAA
AAACCATTCAAGAGTGTAATAAGAGCGAACATTGGAGACGCACAAGCCATGGGACAGGTT
CCAATCACATTTATAAGACAGGTACTAGCTTGTATTTCGTATCCAGAGCTCATTGGAGAA
GGAAATTTTCCTGAAGATGTCAAAGAAAGAGCTCGAGAAATCTTAAACAGTTGCAGTGGG
GGCTCGATAGGATCTTATTCAGCACCGTACGGTATTGATCACATCCGACGCCACGTCGCC
GAGTACATCGAAAGACGAGATGCCCTGCCGGCTAACTGGCAAAATGTGTTTCTCTCTGCC
GGCGCGTCCACAGCGATAAAGTATTGTTTGCAGCTATTTAGTAACGATACGCATGGGAAA
AAGAATGGTGTTTTGACTCCCATTCCTCAATACCCATTATATTCTGCTTGCTACGCGAAG
TACGGCCTTACCCAAGTGGGTTATTATTTGGACGAAACCACTAACTGGAGTCTCAGTATT
GAAGAGTTAGAGCGAAGATTAAACGAGGCTGAGAAGAGGTGCAATGTGAGGGCACTTGTG
GTTATTAATCCAGGAAATCCAACGGGACAAGTTTTAAGTCGTAATAATATGGAAGATATT
ATCAAATTCGTCTACAAGCACAATTTACTTCTTATATCTGATGAGGTCTACCAACACAAT
ATATATGCTGAAGGTATCCAATTCTTCTCATTCAGAAAGGTTATGATGGAACTAGGCGCA
CCGTACTCATCGATCGAGCTGGCTTCGATCATGTCGGCAAGTAAGGGCTACATGGGAGAA
TGCGGTCTGCGTGGAGGCTGGGTGGAGCTCACCAACTTCCATCCCGATGTACAAGCGCAA
CTCTATAAGTTCATGTCGGCCATGGTGTCACCGAATATATTGGGGCAGGCCGCCATTGAC
TGCGTGGCTAAGCCACCTTTACCTGGAGAGCCATCATATGATTTATGGCTGCGCGAAAAG
GAATCAGTGCTTGCGTCCCTTAGAGAACGCGCCAAGATGATAACTGATGGCCTTAACGCA
GGCCAGGGATTCAAATGTAACATAGTGCAGGGAGCAATGTACGCTTTTCCTACTGTTATT
CTGCCTCCGAAGGCCGTTGCAGCAGCTGAAGATGCCAAACAACCACCTGACGTTTTCTAT
GCTTACAGGCTCTTAGAAGAAACTGGTATTTGCGTGGTTCCTGGCAGCGGATTCGGCCAG
GCTCCGGGAACTCATCACATTCGAATGACCATTCTGCCGAAGACGGACGATCTTCGCACT
ATGATTCACAGTATTAAAACCTTTCACCAGAGCTTTATCGAGCGATATACCTAA
Protein sequence:
MASMTLKNINPNILKVEYAVQGPLVARAGEIEEELKRGVEKPFKSVIRANIGDAQAMGQV
PITFIRQVLACISYPELIGEGNFPEDVKERAREILNSCSGGSIGSYSAPYGIDHIRRHVA
EYIERRDALPANWQNVFLSAGASTAIKYCLQLFSNDTHGKKNGVLTPIPQYPLYSACYAK
YGLTQVGYYLDETTNWSLSIEELERRLNEAEKRCNVRALVVINPGNPTGQVLSRNNMEDI
IKFVYKHNLLLISDEVYQHNIYAEGIQFFSFRKVMMELGAPYSSIELASIMSASKGYMGE
CGLRGGWVELTNFHPDVQAQLYKFMSAMVSPNILGQAAIDCVAKPPLPGEPSYDLWLREK
ESVLASLRERAKMITDGLNAGQGFKCNIVQGAMYAFPTVILPPKAVAAAEDAKQPPDVFY
AYRLLEETGICVVPGSGFGQAPGTHHIRMTILPKTDDLRTMIHSIKTFHQSFIERYT