| New model in OGS2.0 | DPOGS204743 |
|---|---|
| Genomic Position | scaffold2303:- 18121-21967 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 241 |
| Single RNAseq reads | 633 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013703 (5e-97) |
| Best Drosophila hit | CG1789 (8e-45) |
| Best Human hit | probable U3 small nucleolar RNA-associated protein 11 (2e-45) |
| Best NR hit (blastp) | UTP11-like U3 small nucleolar ribonucleoprotein [Bombyx mori] (1e-108) |
| Best NR hit (blastx) | UTP11-like U3 small nucleolar ribonucleoprotein [Bombyx mori] (8e-108) |
| GeneOntology terms | GO:0032040 small-subunit processome GO:0006364 rRNA processing GO:0030529 ribonucleoprotein complex GO:0003676 nucleic acid binding |
| InterPro families | IPR007144 Small-subunit processome, Utp11 |
| Orthology group | MCL14870 |
Nucleotide sequence:
ATGTCGTCTTGGAAGAAAGCGGCAAAAGCGAATCAGAAAACACATAAGGAAAGGCATCAG
CCAGAAGCTCGGAAACACTTAGGACTACTAGAGAAGAAGAAAGATTATAAGAAACGAGCC
GAGGATTACCATGAAAAGGGAGCAACGCTCAAACTTTTACGTAAACGAACCTTGGATAAA
AACCCCGATGAGTTCTACTTTCACATGATTAATTCAAGAGTAAAGGATGGGGAACATCAT
GAATTAGAAAAAGAGGATGAAGTAACTTCCGAGCAGGTGAAATTGATGCAAACACAAGAT
CTTAAATATATCAATATGAAGAGAACAATTGAGAGCAGAAGAATACAGAGGATGCAGTCT
CAACTCCACATGACGAACGTAGCGGACTCTACGCCCAACACTCACGTGTTCTTTGTAGAA
GAAGACGAGGCAAAGAACTTTGATTTAGCCAAAAGACTAGACACACATCCCTCACTCATC
AACAGGAAGTCCAACAGACCACGGCTGTCGGATCTGGATAAGATTACTCTTCCTGAAGTT
AACGATGAGTTTGTCAATTCAACTAAGAAAATGAAAGAGCGTACATACAAAGAACTGTCA
AAGAGAATAGACAGGGAAAAACATCTGACGGTAGTCCAACAAAAACTGGAGATCAAGAGA
CATTTACAAGACGCTAAAGTTATGAAGCCAAAGAGAGTCAAGCGAGGCACGGCCGTCTCA
GCGCCCGTCTACAAGTTCCAGTACATGAGAAAAAAATAA
Protein sequence:
MSSWKKAAKANQKTHKERHQPEARKHLGLLEKKKDYKKRAEDYHEKGATLKLLRKRTLDK
NPDEFYFHMINSRVKDGEHHELEKEDEVTSEQVKLMQTQDLKYINMKRTIESRRIQRMQS
QLHMTNVADSTPNTHVFFVEEDEAKNFDLAKRLDTHPSLINRKSNRPRLSDLDKITLPEV
NDEFVNSTKKMKERTYKELSKRIDREKHLTVVQQKLEIKRHLQDAKVMKPKRVKRGTAVS
APVYKFQYMRKK