| New model in OGS2.0 | DPOGS209222 |
|---|---|
| Genomic Position | scaffold1519:- 20-1505 |
| See gene structure | |
| CDS Length | 597 |
| Paired RNAseq reads | 26 |
| Single RNAseq reads | 194 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | beta-secretase 1 isoform A preproprotein (9e-23) |
| Best NR hit (blastp) | unnamed protein product [Mus musculus] (1e-24) |
| Best NR hit (blastx) | beta-site APP cleaving enzyme 1, isoform CRA_b [Rattus norvegicus] (2e-24) |
| GeneOntology terms | GO:0004175 endopeptidase activity GO:0004190 aspartic-type endopeptidase activity GO:0005515 protein binding GO:0005624 membrane fraction GO:0005768 endosome GO:0005783 endoplasmic reticulum GO:0005794 Golgi apparatus GO:0005802 trans-Golgi network GO:0006508 proteolysis GO:0008233 peptidase activity GO:0009986 cell surface GO:0016020 membrane GO:0016021 integral to membrane GO:0030424 axon GO:0031410 cytoplasmic vesicle GO:0050435 beta-amyloid metabolic process |
| InterPro families | IPR021109 Peptidase aspartic IPR001461 Peptidase A1 IPR009007 Peptidase aspartic, catalytic |
| Orthology group | MCL24145 |
Nucleotide sequence:
ATGCAAAAAACAAGTTTAAGTTATTTTTTTGTACTCCTCATCGTGTCCGTGACTTCATGT
GAAGAATATAACTTGTACGGAGATGCTGGACAAGCTTATGCGTTTGAAATTGATATCGGA
CATCCGAAACAAAAGCTTAATGTAATAATTGATACAGGAAGCACAACTTTGGCTATTGCA
GCATATCCAAGAAAAGATAATAATAAATATTTTTATCCTGGTAACTCAACAACAATATAC
AATAGTATCACAAAGATCGAGTCAAAATATTATCAGGGGACATGGGTTGGCCATTTAGTA
TCTGATTTTGTAACCTTCCCTTCACTACCGTTGATACCAGAAGTTAGGTGTGATATCGCA
TTAATAAGTAAGAGTCACAAATTCTTTATGAATGGCTCGGGATGGCAGGGATTACTAGGG
CTTGCATATTTATCAGTAGGAGCCCGAAGTGATGGTGTCATTGTTGGTTCCTGGTTGGAT
TCTGTTGAGAGATCCTTGAATAGGCCTATGTCTTTTCAGTTCAAGTTATGTGGGGTTGAG
AGTCCTAACAATGCAACACATTATGGAAAGTTTGAAATGATAGGTAATATCTCTTAG
Protein sequence:
MQKTSLSYFFVLLIVSVTSCEEYNLYGDAGQAYAFEIDIGHPKQKLNVIIDTGSTTLAIA
AYPRKDNNKYFYPGNSTTIYNSITKIESKYYQGTWVGHLVSDFVTFPSLPLIPEVRCDIA
LISKSHKFFMNGSGWQGLLGLAYLSVGARSDGVIVGSWLDSVERSLNRPMSFQFKLCGVE
SPNNATHYGKFEMIGNIS