New model in OGS2.0 | DPOGS215134  |
---|---|
Genomic Position | scaffold3456:+ 7652-9499 |
See gene structure | |
CDS Length | 1419 |
Paired RNAseq reads   | 1 |
Single RNAseq reads   | 2 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002852 (2e-47) |
Best Drosophila hit   | CG8234, isoform A (2e-19) |
Best Human hit | solute carrier family 2, facilitated glucose transporter member 6 isoform 1 (1e-16) |
Best NR hit (blastp)   | sugar transporter 12 [Nilaparvata lugens] (5e-32) |
Best NR hit (blastx)   | sugar transporter 12 [Nilaparvata lugens] (2e-34) |
GeneOntology terms    | GO:0005351 sugar:hydrogen symporter activity GO:0006810 transport GO:0015144 carbohydrate transmembrane transporter activity GO:0016020 membrane GO:0055085 transmembrane transport GO:0009507 chloroplast GO:0005773 vacuole GO:0005886 plasma membrane |
InterPro families    | IPR016196 Major facilitator superfamily, general substrate transporter IPR005828 General substrate transporter IPR020846 Major facilitator superfamily |
Orthology group | MCL25378 |
Nucleotide sequence:
ATGGGTTTCACCACTCAAAAGGTGCTGATGCTGGGCAGCCTCAGCTCTATAGCTGTCTCA
AACGGATTCCTCTTCGCCCAAACAACAGGAATGCTAAAAAGCTTGCAGAGAAACGAAGAT
GGCTTGAATCTCACCGAGAGCAACATACTGTGGTTAACCTCTACTATTTCAATGATATTC
TTTCTTGGCTCCTTTTTGACAACTTTAAGTGACAACATGGGAAGACGCTGGCCATTGATG
ATATCCTCAGTAGCAATAGTTGTGCAATGGATTATTTTATACAAGGCACAAAATATATAT
CATTTTATGCTGTCAAGGATCATCGCTGGAATTGCTTTCGGAGCTAGATTCTGTTTAAAC
ATACTGGTGACACCTGAATATACTTCCCCAAAAACCCGAGTTTTCTTCCTCAATATAATA
ACATCAGTGTCGCCAGCTATTGGCACTGGGTTGGGCCACTACTTGGGCAACATCTTCCAC
TGGAGAACTGTTGCTTTGATATCAATTTTCCCAACACTTTTTGGTGTTATTGTGCCTTAT
TTTTGCGTCGAAAGTCCTCATTGGCTGGCCTCGAGAGGCAGGTTCCAGGAATGTGAGGAG
AGTTTCAGAAAAATCCACGGAAACAGTCTAAAATCGGAATCAGAACTGCAACATCTAATA
AAAATGGAAAAGTGCAAACTGAGACAAGCTGAAATCACCAATACGAGGACCAGTAAAGCA
AAATTATGCCTCGCATTAAAGAAGAAGTACTTCTGGAATTTAATACTTCTGAGTTTCTTT
ATGAGCTCGTATATTGCTGCAACTGGCAGGGTCGCATTCGCAATCTTAGCGACAAACATT
CTTGAAGACATGACTGGGACTCCTAATATTGTTCTTTATAACGTTCTAGTAGATATTTTT
ATCCTGGTAGGCACCAGTTTATCCTGCGTTCTGGTGAGGAAAATGACGATACGTAATGTG
TTATTTTCCACTGGATTTATGGGCAATGCTGTTTTGGTAATTCTGAGTGCTTGCCTTCAC
TTTGGAGCTGGTGTAGAGAACCTGCGGTGGGTGAATGTATCGTTGTTGGCAGTGTACTTC
ATTTTAATGGAAGCGGGTCCCTCCCCAGTACTAGAGGCTTTATTAGGGGAGATCTTTCCC
TTAGAAATAAAAGTGTACTGTATGTTTCTCGTCGGCGTTATGATATCTGCCTTCGTATCG
TCAGCGCTCATCGTGTTTTCAATATTAGCGAAGGCCATTGGATATTCTGGAACATTCTTA
CTGAACGCTGTAATAATGTCAACAAGTCTAGTATTTATAAAGTTCAAACTACCAGAGACT
AAAGGAAGAACGCTACAAGAGATTGAAGCGTTCTTCAAGACTAATATATTTGATATTGAC
GAAGCGTTGAATGATGAGAAGAAAAATATGCTGTTATAA
Protein sequence:
MGFTTQKVLMLGSLSSIAVSNGFLFAQTTGMLKSLQRNEDGLNLTESNILWLTSTISMIF
FLGSFLTTLSDNMGRRWPLMISSVAIVVQWIILYKAQNIYHFMLSRIIAGIAFGARFCLN
ILVTPEYTSPKTRVFFLNIITSVSPAIGTGLGHYLGNIFHWRTVALISIFPTLFGVIVPY
FCVESPHWLASRGRFQECEESFRKIHGNSLKSESELQHLIKMEKCKLRQAEITNTRTSKA
KLCLALKKKYFWNLILLSFFMSSYIAATGRVAFAILATNILEDMTGTPNIVLYNVLVDIF
ILVGTSLSCVLVRKMTIRNVLFSTGFMGNAVLVILSACLHFGAGVENLRWVNVSLLAVYF
ILMEAGPSPVLEALLGEIFPLEIKVYCMFLVGVMISAFVSSALIVFSILAKAIGYSGTFL
LNAVIMSTSLVFIKFKLPETKGRTLQEIEAFFKTNIFDIDEALNDEKKNMLL