| New model in OGS2.0 | DPOGS210822 |
|---|---|
| Genomic Position | scaffold908:- 78408-83364 |
| See gene structure | |
| CDS Length | 2577 |
| Paired RNAseq reads | 920 |
| Single RNAseq reads | 2638 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007137 (4e-27) |
| Best Drosophila hit | deep orange (1e-134) |
| Best Human hit | vacuolar protein sorting-associated protein 18 homolog (2e-144) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006604 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to vacuolar protein sorting protein 18 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005488 binding GO:0005515 protein binding GO:0048757 pigment granule maturation GO:0008333 endosome to lysosome transport GO:0045176 apical protein localization GO:0015721 bile acid and bile salt transport GO:0043485 endosome to pigment granule transport GO:0046872 metal ion binding GO:0006810 transport GO:0016020 membrane GO:0005764 lysosome GO:0007275 multicellular organismal development GO:0005768 endosome GO:0015031 protein transport GO:0007634 optokinetic behavior GO:0048069 eye pigmentation |
| InterPro families | IPR007810 Pep3/Vps18/deep orange |
| Orthology group | MCL13893 |
Nucleotide sequence:
ATGACTTCAATTTTTGATCAATACGAACAAGCGTCTCAGGTGTCGCAACGCCTAGTTCCT
CCTTCAGAACAGATGACGTCTTCAGGTTACATCAACATCCAACTGGATGATAACAAGCCC
ATGTTTTCTAAGAGACAAATGAATTTCACGCCATCAGATTTAATCACTCACGTTGCTGTT
TCTAGTGATTATCTAGTTCTAGCCATGGCAAATGGAATGATATTTAGACTAGATGTTAAA
ATGCCTGATGAAAATGAAGGTAAGGGAACTGACACACCCATTACTGGTATCCAGTTCCAT
AGAGTGAACAACACAACCAAATTCTTCATATTTGTCACAACCCCCAAAAGGCTGTATCAA
TTCATCGGCCATGCTATGGCTTCCGATGAGAAACCATTCCTGCAATCAATATTTCACTCT
TATCTAACAACCGTAGAGACAGGCTTCCATGAAATACCTTCAACTCTGAAATACTCCAAA
TTGCAGTTCTTTTTTGATAAAACAAATAGTCCAAAAACATTTGCCTGGTTGACGGAGCCA
GGTATATTTTATGGGCAGCTAGATCCTACTTCTCAACAGAATTCCAACTCACTGTTCACT
CAAGGCGAGCTCATAACTTACTCTGATAAAAGTGAAAAAAATGACACCAAAGAAGCAACG
CCACTCTCATTCGTACTTACAGAGTTCCATGTCCTCCTCATGTATTCTGACAGGGTCAAA
GCGGTGTCGCTGCTGAACCAAAAACTGGTATACGAAGACAGATACTCAGAAGTACATGGA
AAGTTGAAGAATATAGTGAAAGATCCTATCGGAAAAACGATTTGGACCGTGACCGATAAA
GCCGTTTTTAGATATAAGGTCGAGAGGGAAGAAAGAAATGTTTGGAGGATATACTCTGAT
AAGGAACAATTCGACCTGGCCAAGCAATACTGTCAAAATAATCCAGCCTATATAGATATA
ATAAACGTGAAACAGGCAGAACTATTGTTCAAGAAAGGCGATTACGATAAAAGTGCTGAA
ATATACGCGGAAACACAGAGCAGCTTCGAGACTGTTTGCCTCAAGTTTTTGGAATGCGAT
CAGGTTAACTCGCTGAAGGTGTACCTCAGTAAGAGATTGGACACTTTGGACGACGACAAG
ACCCTGATATCGATGATAGTTATTTGGATGACGGAGTTGTTCCTGTCGCAACTCGGGTCG
CTCCGTCGCACCGGGAAAGCTGACTCAAACGAGTACCATCAGATCCAGAGCAATTTCGAG
ATCTTCCTTCTCCAACCCAAGGTCACGAAATGTATGCAACACATTAAAACTGTCATTTAC
GATCTGATGTCTTCACACGGAGATAAGCAGAACCTCATCAAGTTGACTATCATCAACGAG
GACCACGAGAACGTAGTGGCGCAAAATATTTACGAGAAGTCGTACGTACAGGCTCTGAAC
ATGCTGCAGCATTTGAAAAAACCCGATCTATTCTATCAGTTCGCTCCGGCCCTGATGGAA
GAAATACCGAGAGAAACCGTCAACGCCTTGATTTCTCTTGGACCGATTCTAAGTTCCTCA
AGATTGTTGCCGGCGTTCCTCTCCTGCGAAAACGACGAGGCTCATGTATCTGAAATCATT
CGATACTTGACATTCATGCTACAGAATTACAATGTCAAGGATCGTGCGATTCATAACTAT
CTGTTGACGCTGTACGCGGAACACGACGTGCCGGCTCTCATGAGATATCTGTCACGGCAA
GGGCAGGAGCTGTCGATGGTGAACTATGACGTACATTATGCCTTACGACTCTGTAGAGAG
AAGAACTTAACGGAAGCGTGCGTGAAGCTGTCGGCGCTGCTCGGCCTTTGGGAGTCGGCG
GCTGAATTAGCGCTGCAAGTTGATACGGGCCTGGCCAAGACTGTGGCCGACATGCCTGAT
GATGTGACGCTGCAGAGGAGATTGTGGCTTGGAGTCGCGGAACACGTTATCACCAAGAAC
CAGGACATCAAGGTCGCCATGAGTCTTCTCGAAGAATGTCCTCTGATCAAAATCGAAGAT
ATCTTACCATTCTTCAGTGACGTCATTACTATTGACCATTTTAGGGAACCCATCTGTCAG
TCCTTACAGGAATATAACAATCAAATAGAAGAACTCAAAGCGGAAATGGAGGACGCCACG
AAGTCAGCCGAGTATGTCCGCAGCGAGATCCAGTCGTTCCGTGGTCGGAGCGCGTTGGTG
TGTTCGTCAGACACGTGCTGCGTGTGTTCGCTGGCGCTTCTCCTGCGACCCTTCTACCTG
TTCCCTTGCAGCCATCGCTTCCACAGCGACTGTCTCCGGACCGAGATACTGCCGGTGCTG
GCGCCCGCACGTCGCAATAAGCTAACGGATCTTCAGAAACAGCTGACGCTGCTGTCTAAC
ATAGAACTGTCGACGGTGACGTCTAGTGGCCTTCCGCTCAGAGAAGTGTTGAAGAACGAG
ATCGATGACATAGTGGCCAGCGAGTGCCTCTACTGCGGGGAGTACATGATCACTTGTATC
GATAGACCATTCATCGCCGACGAGGACTGGGACCGGGTTATGAAGGAGTGGGAATGA
Protein sequence:
MTSIFDQYEQASQVSQRLVPPSEQMTSSGYINIQLDDNKPMFSKRQMNFTPSDLITHVAV
SSDYLVLAMANGMIFRLDVKMPDENEGKGTDTPITGIQFHRVNNTTKFFIFVTTPKRLYQ
FIGHAMASDEKPFLQSIFHSYLTTVETGFHEIPSTLKYSKLQFFFDKTNSPKTFAWLTEP
GIFYGQLDPTSQQNSNSLFTQGELITYSDKSEKNDTKEATPLSFVLTEFHVLLMYSDRVK
AVSLLNQKLVYEDRYSEVHGKLKNIVKDPIGKTIWTVTDKAVFRYKVEREERNVWRIYSD
KEQFDLAKQYCQNNPAYIDIINVKQAELLFKKGDYDKSAEIYAETQSSFETVCLKFLECD
QVNSLKVYLSKRLDTLDDDKTLISMIVIWMTELFLSQLGSLRRTGKADSNEYHQIQSNFE
IFLLQPKVTKCMQHIKTVIYDLMSSHGDKQNLIKLTIINEDHENVVAQNIYEKSYVQALN
MLQHLKKPDLFYQFAPALMEEIPRETVNALISLGPILSSSRLLPAFLSCENDEAHVSEII
RYLTFMLQNYNVKDRAIHNYLLTLYAEHDVPALMRYLSRQGQELSMVNYDVHYALRLCRE
KNLTEACVKLSALLGLWESAAELALQVDTGLAKTVADMPDDVTLQRRLWLGVAEHVITKN
QDIKVAMSLLEECPLIKIEDILPFFSDVITIDHFREPICQSLQEYNNQIEELKAEMEDAT
KSAEYVRSEIQSFRGRSALVCSSDTCCVCSLALLLRPFYLFPCSHRFHSDCLRTEILPVL
APARRNKLTDLQKQLTLLSNIELSTVTSSGLPLREVLKNEIDDIVASECLYCGEYMITCI
DRPFIADEDWDRVMKEWE