| New model in OGS2.0 | DPOGS210849 |
|---|---|
| Genomic Position | scaffold908:+ 84342-89948 |
| See gene structure | |
| CDS Length | 1221 |
| Paired RNAseq reads | 689 |
| Single RNAseq reads | 1822 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006977 (2e-153) |
| Best Drosophila hit | Arc42 (1e-84) |
| Best Human hit | short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (1e-88) |
| Best NR hit (blastp) | PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] (2e-108) |
| Best NR hit (blastx) | PREDICTED: similar to Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (SCAD) (Butyryl-CoA dehydrogenase) [Tribolium castaneum] (3e-101) |
| GeneOntology terms | GO:0050660 FAD binding GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0005739 mitochondrion |
| InterPro families | IPR009100 Acyl-CoA dehydrogenase/oxidase IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR006092 Acyl-CoA dehydrogenase, N-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal |
| Orthology group | MCL20422 |
Nucleotide sequence:
ATGGTTGCGGGTGCAATTTTAAAAACAACCAAATTAAACTCAAACTTGCTGCAATGTGTA
AAATTTGTTGCACAAAGCCGCAGTTTTACAACCCAGCTGACTGAACAACAACTTGAAATA
CAAGAACTGACAAGAAACTTTAGTGAAAATCAACTAAAGCCCAAAGCCGCCAAATTAGAC
TCTGAAGGTCGCTTCCCATTTAGCGAGATAAAATCCCTTACAAATCTGGGTTTGATGGGC
GCATGTGTCGACCAAAGCTATGGAGGTCTTGATCTGGACTACCTGTCGTTAGCGATAGCC
GTCGAGGAGATCTCCCGCGGATGTGCCAGCACTGGAATGATACTCTCCATACACAACTTC
CTCTACGCAAACTTGGTTAACGAGAAGGGCACTCCCGAACAGAAGGAGAGATTTCTGTGC
GATTTCACAAAGGGCTCGCTTGGATGTTTCGCTTTGAGTGAACCCAATGCCGGCAGCGAC
GTCGCTAACATAAGGACGAGAGCACGAAAGGATGGTGATTATTGGATATTGAATGGTAAG
AAGAGCTGGGTGTCCACGGCCGTGGAGGGGTCCGCCGCCGCCGTCTTCGCGACCTTCGAC
CCTGAACTACGGCATAAAGGACTTGCTTGTTTCCTAGTACCTTTGGACGCTGAGGGAGTT
TTCAGAGGCAAGAAAGAGCCTTTAATGGGCGTCAGGGCGGTGACGGCGTGCGACCTCATG
CTGGAGGAGGTCCGCCTGCCGAGCTCGTGTCTGCTGGGGAGGGAGGGGGAGGGGTTCAAG
ATAGCCATGGAACAGCTCGACCAGGGAAGGATAGGCATCGCCGCGCACGCTGTCGGCATC
GCCCAGTCAGCTTTAGACACAGCAATATCGTATGCCAAAGAAAGACACGCCTTCGGTAAA
AATCTAACAAGACTGCCGTCGGTTAAGGATCGTCTGACGGACATGTGCATGCTGGTGGAG
ACGGCGAGGCTGCTGACGTACCGCGCGGCCTGTGACGTCAGCACCAAGAACAGCGCGATG
GCGAAGTACGTGGCCGGCCGCGCCGCCACGGCCGCGTCCGACCACTGCGTGCAGGTGCTG
GGCGGCAGGGGGCTCTCCACGCACTACAGCGCCGAGAGACATTACAGGGACGCGAGAGGC
ACACAGATATACGGCGGAGTGACGGACATACAGAAACGATTGGTTGGACATTACCTGCTC
AAAGAACACAACGCCTTGTAA
Protein sequence:
MVAGAILKTTKLNSNLLQCVKFVAQSRSFTTQLTEQQLEIQELTRNFSENQLKPKAAKLD
SEGRFPFSEIKSLTNLGLMGACVDQSYGGLDLDYLSLAIAVEEISRGCASTGMILSIHNF
LYANLVNEKGTPEQKERFLCDFTKGSLGCFALSEPNAGSDVANIRTRARKDGDYWILNGK
KSWVSTAVEGSAAAVFATFDPELRHKGLACFLVPLDAEGVFRGKKEPLMGVRAVTACDLM
LEEVRLPSSCLLGREGEGFKIAMEQLDQGRIGIAAHAVGIAQSALDTAISYAKERHAFGK
NLTRLPSVKDRLTDMCMLVETARLLTYRAACDVSTKNSAMAKYVAGRAATAASDHCVQVL
GGRGLSTHYSAERHYRDARGTQIYGGVTDIQKRLVGHYLLKEHNAL