New model in OGS2.0 | DPOGS213226  |
---|---|
Genomic Position | scaffold636:- 65947-67516 |
See gene structure | |
CDS Length | 1245 |
Paired RNAseq reads   | 25 |
Single RNAseq reads   | 73 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002341 (2e-77) |
Best Drosophila hit   | ND |
Best Human hit | leucine-rich repeat-containing protein 27 isoform a (2e-10) |
Best NR hit (blastp)   | PREDICTED: similar to mCG21945 [Tribolium castaneum] (3e-26) |
Best NR hit (blastx)   | golgin IMH1, putative [Pediculus humanus corporis] (1e-23) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
Orthology group | MCL24148 |
Nucleotide sequence:
ATGACAATGTCCTGGGAGACATCCACTCCATATACTTTAAATCTGTACGAAGAAAATTTG
AACGATGAAAATATTATCGATTTATCATCCCAATCATTATCTGAACTTCCACATCTACAA
AACAATTTGGTTTGCGTTCTTTATTTACAAGATAATAAATTGAAATTATTACCTGAAGAT
TTATTTCTCCTTCTGCCAAATTTAATGTGGCTCGATTTAAGGGATAATGAATTAACTGAT
ATTCCAATAACAATTAAAGGTCATAAGTCACTTACCCATTTACTTATGCAAAATAATAAA
CTTATATCCTTACCTAACGAACTGGGGACAGTTAAATGTTTAAAAGTACTCCAGTTAAGC
GGAAATCCTCTTATGTATCCGCCAAGAGACGTCATTAACGCGGGAACTGCAAAAATTTTG
TCATTCCTGTTAGCTATGTATGAGGCTGAAAATGGTTCTGTTTTATCCGATAAAACAAGT
GCAAGTGATATTGACAAAATTATTAATCGGGCTCGGAGCTACAACTCCGTGTTGGATGAA
GAGAAATTGCAGAACCACAAAACACTCTCAGTACAATTCAGTGAAAGGGATAATTATGAT
TCCGATGAGGATTACTACTCCAAAATAAAGGGAAAGTGTCCAAAACTACATAAAAGTAGA
ACAAAGACTCTGCCGCCTCACTGTCAGAGTTCAAAATATTTGAAACGACCTATAATTTCA
CTCGAACAAGTTAACGAGAAAATGAAGCAGAGTTACTTTCAAGACATAGCTCTCAAGAAA
CACAAGGATTTTGTTGTGAAGACGGAAAAAATACTCCAAGGTAAAAAGAACGTTGAATTA
TTAAGAAACTGGCGTAAAACGTACCGCAATAAACAGTCCAACCTGCCTTTGGATCCCGAT
TCTTATAAGCTCACAGCCAAGAAATTCCCGTATGACACTGATCCCGAATATATGACATTT
TTAAACCGGGAAGACATAGAAAAGGATCTGCCCAACAAATATAAAAAGAGATTGTATAGA
AAGGCTAAACCGAGTGTGCCAAGAAAGAGAAGTAATGATGTACATTTGGCCATGAAGATA
AAGCAGTTATTTGAAAACTTGGAAGCTTTAGACCTGAACAGAGAGACCATGTCACCTAGA
ACGGAACAGAAAATATTACTGGGAGAAATACAAAAGATATCAGAAATTAAACAGAAATTG
ATGGAACTGTCCACAACAAATACACAATCGGTGACCACAGATTGA
Protein sequence:
MTMSWETSTPYTLNLYEENLNDENIIDLSSQSLSELPHLQNNLVCVLYLQDNKLKLLPED
LFLLLPNLMWLDLRDNELTDIPITIKGHKSLTHLLMQNNKLISLPNELGTVKCLKVLQLS
GNPLMYPPRDVINAGTAKILSFLLAMYEAENGSVLSDKTSASDIDKIINRARSYNSVLDE
EKLQNHKTLSVQFSERDNYDSDEDYYSKIKGKCPKLHKSRTKTLPPHCQSSKYLKRPIIS
LEQVNEKMKQSYFQDIALKKHKDFVVKTEKILQGKKNVELLRNWRKTYRNKQSNLPLDPD
SYKLTAKKFPYDTDPEYMTFLNREDIEKDLPNKYKKRLYRKAKPSVPRKRSNDVHLAMKI
KQLFENLEALDLNRETMSPRTEQKILLGEIQKISEIKQKLMELSTTNTQSVTTD