| New model in OGS2.0 | DPOGS213230 |
|---|---|
| Genomic Position | scaffold636:+ 9228-15233 |
| See gene structure | |
| CDS Length | 1551 |
| Paired RNAseq reads | 896 |
| Single RNAseq reads | 2495 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002231 (0.0) |
| Best Drosophila hit | CG2010, isoform A (0.0) |
| Best Human hit | F-box/LRR-repeat protein 12 (1e-06) |
| Best NR hit (blastp) | PREDICTED: similar to CG2010-PA, isoform A isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG2010-PA, isoform A isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0000151 ubiquitin ligase complex GO:0005737 cytoplasm GO:0006511 ubiquitin-dependent protein catabolic process |
| InterPro families | IPR022364 F-box domain, Skp2-like IPR001810 F-box domain, cyclin-like |
| Orthology group | MCL15033 |
Nucleotide sequence:
ATGGATATACCGACGGATGTATGGGGACAGCTGGCTCTCGAGGCGAGTCAGGTTTACCTG
ACCGAGGGCGGACAGTTGAGAAGTCCATTCGCGAATACGACTATAGAGAAGTTACCAGAC
AAGGTATTGCTTAATATCTTCTCGTACTTGTCCCACCGTGAGATATGTCGTATGGCCACC
GTGTGTAAGAGATGGCGAATGGTGGCATACGACACAAAACTATGGACGCACGTTAGTTTG
AGACCCGAAATATCTGGACTCCATGTTGGCTCACTGGAGTCTCTCCTTGCGTTAATATCA
ATAAGGTTCGGACCGTCTCTACGATACATAGAGCTGCCAATAGAGTTGATAACTCACACA
GTATTACACGAACTGGCCGCTAAATGTCCTAATTTAACTCACATGTTATTAGACTTCAGT
ACAGCCATGCAGCTTCACGACTTCTCCGAGATGCAGGCGTTTCCTACTAAGTTGCGTTAT
TTGTGTATTTGTCTGTCCGAAGTTATCTTCATGGAAGGTTTCATGAGGAAGATTTACAAT
TTTATAAATGGACTGGAAATATTACATTTAATAGGTACGTACGAGAAGGTCGAAGAGGAG
GAGGAGGAGATATACGAGGTTATAAACGTTCACAAATTAAAATCAGCGACGCCCAACTTG
AGGGTCATTAACTTGTACGGGATCAACTTCGTGGACGACTCACACATAGACGCGTTCAGC
TCCAACTGTATACAGCTGGAATGTCTGGCCGTGAACTTCTGTAACAAGGTGACCGGTTCC
ACTATGAAGACGTTGTTCCAGCGCTCCAGAAGACTCACCTGTCTCTTGATGCACGGATGT
AGTCTCCAGTCAGAGAACGTGATGCAGGTGGAGTGGGAGAAGTCTTCCATCCAGGAGTTG
GACGTGACCGCCACGGACCTGTCGACGGAGTGCCTCATAGACATGCTCACCAGGATACCG
AGCCTCAGGTTCCTCTCCGCCGGACAGATCAATGGATTCAACGACACCGTGCTGAAAGCT
TGGATGGAAGCCGGCACTGCGAGGAACCTCGTAGCGCTGGATGTGGACGCGTCAGACAAC
CTGTCGGACGAGGCGCTCCACCGGTTCCTGTCCCGCCACGGCGGAGCGCTGCACGCGCTG
GCGCTGGCCGGCATGCCGCACATCACCGACCAGCTGTGGCAGAGCGTGCTGTCGCTCCTC
ACTAACGCCAAGATCTTAATCATGGGAACACAGGAGCGACTCGGCGTCAACATCCACGTC
GACCAGCTGATGGACGGTATAGCCAACAGCTGCCCCAACCTCGAGAGGCTGGAGCTGAGG
TGGGACCCCGAGAACCTCCGATTCAGTGACAAGAGCCAGAAAGCTATAGACATTCTACGC
GTCAAATGCTTGAAACTCAAGTGTCTCGTCCTGAGCGACGGCCGCTACTACGAGATAGTG
AAGGCCAACTTCGAGCGCGCGGACCGCACCACGGTGGTGCGCACGTCCACCAACTGCCGA
GTGTCCAACTACTACCTGCTCTCCAACTACAAGGACCTAATATTTAATTGA
Protein sequence:
MDIPTDVWGQLALEASQVYLTEGGQLRSPFANTTIEKLPDKVLLNIFSYLSHREICRMAT
VCKRWRMVAYDTKLWTHVSLRPEISGLHVGSLESLLALISIRFGPSLRYIELPIELITHT
VLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLSEVIFMEGFMRKIYN
FINGLEILHLIGTYEKVEEEEEEIYEVINVHKLKSATPNLRVINLYGINFVDDSHIDAFS
SNCIQLECLAVNFCNKVTGSTMKTLFQRSRRLTCLLMHGCSLQSENVMQVEWEKSSIQEL
DVTATDLSTECLIDMLTRIPSLRFLSAGQINGFNDTVLKAWMEAGTARNLVALDVDASDN
LSDEALHRFLSRHGGALHALALAGMPHITDQLWQSVLSLLTNAKILIMGTQERLGVNIHV
DQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDILRVKCLKLKCLVLSDGRYYEIV
KANFERADRTTVVRTSTNCRVSNYYLLSNYKDLIFN