| New model in OGS2.0 | DPOGS201622 |
|---|---|
| Genomic Position | scaffold11746:- 3732-6456 |
| See gene structure | |
| CDS Length | 591 |
| Paired RNAseq reads | 1640 |
| Single RNAseq reads | 5821 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013298 (1e-101) |
| Best Drosophila hit | ryanodine receptor 44F, isoform A (8e-84) |
| Best Human hit | ryanodine receptor 1 isoform 2 (3e-77) |
| Best NR hit (blastp) | ryanodine receptor [Heliothis virescens] (1e-113) |
| Best NR hit (blastx) | ryanodine receptor [Heliothis virescens] (2e-104) |
| GeneOntology terms | GO:0006816 calcium ion transport GO:0005219 ryanodine-sensitive calcium-release channel activity GO:0016021 integral to membrane GO:0005789 endoplasmic reticulum membrane GO:0006936 muscle contraction GO:0006874 cellular calcium ion homeostasis GO:0005509 calcium ion binding GO:0055085 transmembrane transport GO:0005875 microtubule associated complex |
| InterPro families | IPR005821 Ion transport IPR015925 Ryanodine receptor-related |
| Orthology group | ND |
Nucleotide sequence:
ATGCTATTGACAATCATAGTTTACATATACACCGTCATAGCGTTCAACTTCTTCAGAAAG
TTCTACGTCCAGGAAGAAGACGATGAAGTGAATAGGAACTGTCATGACATGCTGACGTGC
TTCGTATTCAACCTGTACAAGGGTGTTCGAGCTGGTGGTGGTATCGGTGATGAGTTAGAG
CCTCCTGACGGCGATGACTCCGAAGTCTACCGCATCATCTTCGATATCTCATTCTTCTTC
TTCGTCATTGTTATCCTGCTCGCTATCTTACAGGGTTTGATCATCGACGCCTTCGGTGAG
CTCCGTGACCAGCTCGAGTCCGTCAAAGAGGACATGGAGTCAAACTGCTTCATATGCGGC
ATCAATAAAGATTACTTTGATAAGGTGCCACACGGATTCGACACACACGTCCAGCGCGAG
CACAACCTCGCTAACTACATGTTCTTCCTCATGCATCTCATCAATAAACCGGACACAGAA
TATACAGGTCAAGAGACATTTGTATGGAACATGTATACACAGAGATGTTGGGACTTCTTC
CCAGTCGGAGATTGTTTCAGAAAACAATACGAAGATGCAATGGGAGAGTAG
Protein sequence:
MLLTIIVYIYTVIAFNFFRKFYVQEEDDEVNRNCHDMLTCFVFNLYKGVRAGGGIGDELE
PPDGDDSEVYRIIFDISFFFFVIVILLAILQGLIIDAFGELRDQLESVKEDMESNCFICG
INKDYFDKVPHGFDTHVQREHNLANYMFFLMHLINKPDTEYTGQETFVWNMYTQRCWDFF
PVGDCFRKQYEDAMGE