| Genomic Position | scaffold353:+ 2148-5771 |
|---|---|
| See gene structure | |
| CDS Length | 870 |
| Paired RNAseq reads | 42 |
| Single RNAseq reads | 420 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014268 (3e-71) |
| Best Drosophila hit | sloppy paired 1 (1e-08) |
| Best Human hit | forkhead box protein J3 isoform 1 (5e-14) |
| Best NR hit (blastp) | forkhead transcription factor J2 [Strongylocentrotus purpuratus] (1e-13) |
| Best NR hit (blastx) | forkhead transcription factor J2 [Strongylocentrotus purpuratus] (3e-12) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR001766 Transcription factor, fork head IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL40956 |
Nucleotide sequence:
ATGAGCGATTCGCCAGGAGTAGAGTGGCTCCCGGCGTACAGCCCAGGACCACCGCGGCAC
AGCCCCCTTGGTCCAATTCCTCGCTTTCTTTATGAAGATGTACAACCGCCACTATTACAA
CAGGAAAATAACAACAAGGAAATTGACCAGAAACAAGACAAAAATAAAATCAAACACGCC
AAACCTGCTTATAGCTATGCGAGTATGATTAGATTGGCTATCAGCAGCTCGCCCAATGGA
AAGATGACGTTGAATGAGATATACAACTACATCTGCAACGCCTTCCCCTATTACAAGGAG
GCTGGCAAGGGCTGGATGCTTAGAACTGCCGCACGAAAACTGGCTTTTAAAGAAACAGCA
TCGACATCGGTCGATCCGTTTCAGAGTTACGATGCCGCGGTCAGACACACGCACACATCC
ACACGGCCGAGGCTCGTGATGGCGCCCTACAGTCCAGAGTGTAGTTCAAACAGTTCAGGA
GAGGCCGGCGCGTCTGGAGTGGACGCCGCGCCGACGCCGCCCGCTACGCCCACGACGCCC
ACCGCGCCCACCACACCCACGACGACCACCGTCCTCAAAGAGGAGCCACTGGTCAAAGGG
GAACCCAACTTGGAACACACTGACGACGCGCTGTCCGCCCTCATGGACGACGAGCTCATC
ACGGACGCCGACATCAGCAGAGAGAGCTGGTGGTGGTCGGGTGCGAGGCGGCACGTTTGT
GTGGTGAGACACAGCGCCCTCACCGACGACTACGGCAACTTCCTGGACCTGCGTCACCAC
TGCGACTGTCCTCCGGACACACCGGACACCGCCGACCTCGCCGCGCAGGCGCCCACGACC
GCGCTCACCCCGCCCTGGCACGCCTTATAA
Protein sequence:
MSDSPGVEWLPAYSPGPPRHSPLGPIPRFLYEDVQPPLLQQENNNKEIDQKQDKNKIKHA
KPAYSYASMIRLAISSSPNGKMTLNEIYNYICNAFPYYKEAGKGWMLRTAARKLAFKETA
STSVDPFQSYDAAVRHTHTSTRPRLVMAPYSPECSSNSSGEAGASGVDAAPTPPATPTTP
TAPTTPTTTTVLKEEPLVKGEPNLEHTDDALSALMDDELITDADISRESWWWSGARRHVC
VVRHSALTDDYGNFLDLRHHCDCPPDTPDTADLAAQAPTTALTPPWHAL