New model in OGS2.0 | DPOGS208034  |
---|---|
Genomic Position | scaffold2159:- 9875-15900 |
See gene structure | |
CDS Length | 1056 |
Paired RNAseq reads   | 412 |
Single RNAseq reads   | 901 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001502 (5e-107) |
Best Drosophila hit   | beta subunit of type I geranylgeranyl transferase (3e-79) |
Best Human hit | geranylgeranyl transferase type-1 subunit beta (2e-85) |
Best NR hit (blastp)   | geranylgeranyltransferase type I beta subunit [Bombyx mori] (4e-174) |
Best NR hit (blastx)   | geranylgeranyltransferase type I beta subunit [Bombyx mori] (2e-152) |
GeneOntology terms    | GO:0003824 catalytic activity GO:0005575 cellular_component GO:0008150 biological_process GO:0016740 transferase activity |
InterPro families    | IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid IPR001330 Prenyltransferase/squalene oxidase |
Orthology group | MCL13315 |
Nucleotide sequence:
ATGAATAACGAGGAAAATAACTGTTTGGCTCACAGACAGCACGTTAAATATTTTATGAGG
TTTCTCAATGTTCTACCAGCTTCTCTATCATCTCACGACACGACCAGGGTAACCATAGCA
TATTTTTCAGTGGCCGGTCTAGATGTATTAGGTTCTATAACATCAATGACAATAGATATG
CAGTCGAGGATAATAGAATGGATATACAGGCTACAAGTTGAACCAAATAAAGAAACGGGA
GATATGACAGCTTGTGGTTTTCAAGGTTCTTCGACAATTAACATGCCCTTCGACTCGGAA
AAGAGTCAATACAGATGCGGTCACCTGGCTATGACGTACACCGGCCTCTGTGTGCTGTTG
ACTTTAGGTGACGACCTGTCTAGAGTGAACAGGAGAGCCTTGGTTGAAGGCGTGAAAGCT
TTACAGCGCGAGGAAGGTAATTTTTCAGCGACGCTATCTGGCTGTGAGTCAGATATGAGA
TTCGTGTATTGCGCCGCCTGTATCAGTTACATTCTGAACGATTGGTCGGGTTTTGACGTT
AAACGTGCCACTGACTACATAATAGATTCCATAGGTTACGACTACGGTATCGCTCAGTGT
CCAGAGCTCGAATCCCATGGCGGGACCACATTCTGCGCTCTGGCAACACTCAGTTTGACG
AACCAATTGGATAAATTGACTATAGAACAAATAGAGGGCTTGAAGCGGTGGTTACTGTTT
AGACAGATAGATGGTTTTCAAGGTCGCCCCAACAAACCCGTCGATACTTGCTATAGTTTT
TGGGTAGGCGCTTCATTAAAGATCTTGGATGCCTTACATCTATCTAACTTTGAGAGCAAC
AAGAGTTACGTGTATGAGACTCAGGATTGCGTTGTCGGTGGATTCTCAAAATGGCCGGAT
ACATGCACGGATCCGATGCATACATATCTCGGTTTGGCAGGACTTAGTCTAATAGGTGAG
AGCGGGCTCCTTGAAATTATACCAACTTTAAATATAACGAAGAAGGCCCACGACCATATG
AAATATTTACACCGAATGTGGGAGACCGAATCATAG
Protein sequence:
MNNEENNCLAHRQHVKYFMRFLNVLPASLSSHDTTRVTIAYFSVAGLDVLGSITSMTIDM
QSRIIEWIYRLQVEPNKETGDMTACGFQGSSTINMPFDSEKSQYRCGHLAMTYTGLCVLL
TLGDDLSRVNRRALVEGVKALQREEGNFSATLSGCESDMRFVYCAACISYILNDWSGFDV
KRATDYIIDSIGYDYGIAQCPELESHGGTTFCALATLSLTNQLDKLTIEQIEGLKRWLLF
RQIDGFQGRPNKPVDTCYSFWVGASLKILDALHLSNFESNKSYVYETQDCVVGGFSKWPD
TCTDPMHTYLGLAGLSLIGESGLLEIIPTLNITKKAHDHMKYLHRMWETES