New model in OGS2.0 | DPOGS201464  |
---|---|
Genomic Position | scaffold124:+ 103501-105063 |
See gene structure | |
CDS Length | 1380 |
Paired RNAseq reads   | 20 |
Single RNAseq reads   | 85 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002616 (1e-130) |
Best Drosophila hit   | CG5819, isoform B (3e-22) |
Best Human hit | leucine-rich repeat-containing G-protein coupled receptor 4 precursor (2e-16) |
Best NR hit (blastp)   | leucine-rich transmembrane protein [Aedes aegypti] (4e-37) |
Best NR hit (blastx)   | leucine-rich transmembrane protein [Aedes aegypti] (2e-38) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
Orthology group | MCL39683 |
Nucleotide sequence:
ATGGATAATCTTATCCACCTGGATTGTTCCTATCGAGGACTTAGTGAATTACCAGATGGG
TTAGATTATAACGCTCAAGTGTTAATTCTATCAAATAACAACTTTGTCGATTTTCCAGAT
GGACTGGAAAAGTTCAATAACGTACAAAGTTTGGATTTATCGGGAAATCTTTTGACAACA
CCACTGCCTAGATACTTTCAAAATTGGGCAGACCTTAAAATCCTCAATTTGTCTAACAAC
AATTACATTTCATGGTTAAGCAGTAATCATATCTTTACTATTGTTAGACTTGATTTATCT
AAGAATAAGATAAACAATATCGAAGGAGATGCTTTTGCCAAAATGCCAAGACTAGTATTC
CTCGAATTATCGGAGAACAGAATTGACAATCTCCCAAATGGAATATTTAGCAAGGCAACA
AGATTAGAAATAGTGATACTGTCAAGAAATTATTTCTCCGAATTACCAAGATTTGAATCT
GTATCTCTAAGAAATTTACATGTGAGTAGTTGTCAAATTACTACTCTCGATGTTAATGCA
TTAAGTGAGATGCGGTCTTTATTGGAATTGGATTTGTCAATAAATCAGCTTGAATCAATT
CCGGATAATCTAGCCTCAAATTCATTGCAGGAGCTAGATTTAAGTTACAATGGAATTGAT
ACTCTTACGGATCTAACTTTCTCTTCGCTGCCGCACTTAGCGGTTTTGGATTTGAGAGGT
AACGAATTTAAAGAGGTCTGGTCTACTTCTCACTTCGCCTCAAATCCATTTTTGAGAACG
GTTCATGTGAAAGGAAACAGATGGAGTTGCGAAGGCTTCAGCGTCAACCTCCTCTTGACG
TATGAATTTTTGACGAAGGAACCGCCGAAAGTTTATGACATAGGTTCATTGATTTGTTAT
TCTCCATCAAACGTGACGCAAATGAGCTGGCAGCAGGCTTACATCCGAACATGGCATGCA
GATGAACAATCACCATCGACTTACACTTTCATAGCTGTTATGATAGGAATGATCATGGGG
GTCATTATAACCTCTTTTGTTTGTAGATTTGTAATGTCCTTTAACAAACCTGATCCACCT
ACATCTATCCCTGAAACTACAGCTTTAAATGGTACTACAAATCAACCGAGGTCTGAGTCC
GTTGTAATGAGGGTGCAACTAAGGGAGGACCTACCACCAACTTATGACGAAGCTCTTCTA
TTACCCCGATTGAATGCCTCATTTCATTCTCTTCCTGATTTCATAGAGGAAGAAGAAGTA
GCAGAAAATCGTGTACAAAGACAACGTAGATCTAGATCAATAGGCGATTTAACAGATACT
AGACATAGGATCGATGATCGGCGATCAGTAAGAAGGGCTGTTGATATTAATTTTGATTAA
Protein sequence:
MDNLIHLDCSYRGLSELPDGLDYNAQVLILSNNNFVDFPDGLEKFNNVQSLDLSGNLLTT
PLPRYFQNWADLKILNLSNNNYISWLSSNHIFTIVRLDLSKNKINNIEGDAFAKMPRLVF
LELSENRIDNLPNGIFSKATRLEIVILSRNYFSELPRFESVSLRNLHVSSCQITTLDVNA
LSEMRSLLELDLSINQLESIPDNLASNSLQELDLSYNGIDTLTDLTFSSLPHLAVLDLRG
NEFKEVWSTSHFASNPFLRTVHVKGNRWSCEGFSVNLLLTYEFLTKEPPKVYDIGSLICY
SPSNVTQMSWQQAYIRTWHADEQSPSTYTFIAVMIGMIMGVIITSFVCRFVMSFNKPDPP
TSIPETTALNGTTNQPRSESVVMRVQLREDLPPTYDEALLLPRLNASFHSLPDFIEEEEV
AENRVQRQRRSRSIGDLTDTRHRIDDRRSVRRAVDINFD