New model in OGS2.0 | DPOGS205218  |
---|---|
Genomic Position | scaffold940:+ 61659-64725 |
See gene structure | |
CDS Length | 384 |
Paired RNAseq reads   | 36 |
Single RNAseq reads   | 1612 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014398 (8e-32) |
Best Drosophila hit   | eukaryotic release factor 1, isoform A (2e-27) |
Best Human hit | eukaryotic peptide chain release factor subunit 1 (3e-22) |
Best NR hit (blastp)   | eukaryotic translation termination factor 1 [Bombyx mori] (4e-31) |
Best NR hit (blastx)   | eukaryotic translation termination factor 1 [Bombyx mori] (4e-30) |
GeneOntology terms    | GO:0006415 translational termination GO:0003747 translation release factor activity GO:0018444 translation release factor complex GO:0005829 cytosol GO:0008079 translation termination factor activity GO:0005737 cytoplasm GO:0006605 protein targeting GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0016149 translation release factor activity, codon specific GO:0007224 smoothened signaling pathway |
InterPro families    | IPR005142 eRF1 domain 3 IPR004403 Peptide chain release factor eRF1/aRF1 |
Orthology group | ND |
Nucleotide sequence:
ATGACAAGAAGACAGCTGGCCGTGAACTTGGCTCGTGCAGTCCAGCCGTTATGTGTACTC
GAATCAGACTTCGGGTTCAAAATAAACTGTGCCTTCAAAAAATCAGGACTATTCAGAGTA
AGGAATCTGGGTGGAGTTAAAGCTCACGCTAGCATAGGTGAGGATGACACAGGAAAATAC
TGTTTTGGTGTCGATGATACATTAAGGGCTTTGGAACTCGGAGCTGTTGAGACACTCATA
TGCTGGGAAAATCTAGACATTCAAAGATATGTTTTGAAATCTCACGCAACCAGCCAGGAG
ACTATCTTGCATCTGACACCGGAACAGGAAAAAGACAAGTCACACTTCACCGACAAAGAC
GTGAGTAGACTTGATTTGATTTAA
Protein sequence:
MTRRQLAVNLARAVQPLCVLESDFGFKINCAFKKSGLFRVRNLGGVKAHASIGEDDTGKY
CFGVDDTLRALELGAVETLICWENLDIQRYVLKSHATSQETILHLTPEQEKDKSHFTDKD
VSRLDLI