| New model in OGS2.0 | DPOGS212510 |
|---|---|
| Genomic Position | scaffold2240:+ 15523-28645 |
| See gene structure | |
| CDS Length | 939 |
| Paired RNAseq reads | 771 |
| Single RNAseq reads | 2163 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009778 (6e-20) |
| Best Drosophila hit | lasp, isoform B (7e-65) |
| Best Human hit | LIM and SH3 domain protein 1 (1e-35) |
| Best NR hit (blastp) | PREDICTED: similar to LIM and SH3 domain protein F42H10.3 [Tribolium castaneum] (2e-68) |
| Best NR hit (blastx) | PREDICTED: similar to LIM and SH3 domain protein F42H10.3 [Tribolium castaneum] (8e-71) |
| GeneOntology terms | GO:0015629 actin cytoskeleton GO:0008270 zinc ion binding GO:0007279 pole cell formation GO:0045856 positive regulation of pole plasm oskar mRNA localization GO:0003779 actin binding GO:0007291 sperm individualization GO:0070864 sperm individualization complex GO:0005925 focal adhesion GO:0007283 spermatogenesis |
| InterPro families | IPR001781 Zinc finger, LIM-type IPR000900 Nebulin 35 residue motif IPR013998 Nebulin |
| Orthology group | MCL15352 |
Nucleotide sequence:
ATGAATAAAACTTGCGCAAGGTGCGAAAAAACTGTTTATCCGACAGAGGAATTGAAATGT
TTGGACAAGGTGTGGCACAAAGGCTGCTTCAAATGTCAGGAGTGTGGTATGACTCTCAAC
ATGAGGACATACAAGGGTTACGGGAAACTGCCGTACTGTGAGTCGCACGTGCCCAAAGCC
AAGCACACCACCATGGCTGAAACTCCTGAACTGAAGAGAATAGCTGAGAACACGAAGATA
CAGAGCAATGTGAAGTACCACGCTGACTTTGAGAAGAGTAAGGGGAAATTCACACAGGTG
GCCGATGACCCTGAGACTCTTCGCATCAAGATGAACACTAAGATAATCAGCAACGTGGCT
TACCACGGAGAACTGGAGAAGAAGGCGATGATGGAGAAGCAGCGGCAGATCAATGAGAAC
GGAGAAATCATCGATGTGGGCACCAACGATAACTACCATCACCAAATCGAGTCATACGCC
AGTGAGATGCTACCACCCAACCTACCACCGAACCTACCACAGAAGAATCACTACCAGACA
CCGACACAGTCCCGCTACGAGTACCGTCAAGAGGAAGTATATCCTAAGTACGAGGACTAC
CCGAGAAACGCAAACTACCAGCCACATAACAATCAGAATCAGAATTATGGTAATCAAAAC
CAGAATTATGGTAATCAAAACCAAAATTACGGTAATCAGAAAATTGGTAGAATACAGGAT
TATGATCCTCTGAGTGATGGTCCAAGGGCTGTTCCGAACACTCAGAGGGCTTCGGCTACC
CTTATATACAACAGCTCCAATGATAAACAAGGGGCTCATCAGTCTCAGTCAGCTCAGTCT
CGGCACATCGGACGAGTTACAGACTTAGACCCAATGGCGGCGGACCAGAACAGACACACA
CCACACACGAACCAGAATCTTTACCTCGTCATCCCCTGA
Protein sequence:
MNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECGMTLNMRTYKGYGKLPYCESHVPKA
KHTTMAETPELKRIAENTKIQSNVKYHADFEKSKGKFTQVADDPETLRIKMNTKIISNVA
YHGELEKKAMMEKQRQINENGEIIDVGTNDNYHHQIESYASEMLPPNLPPNLPQKNHYQT
PTQSRYEYRQEEVYPKYEDYPRNANYQPHNNQNQNYGNQNQNYGNQNQNYGNQKIGRIQD
YDPLSDGPRAVPNTQRASATLIYNSSNDKQGAHQSQSAQSRHIGRVTDLDPMAADQNRHT
PHTNQNLYLVIP