| New model in OGS2.0 | DPOGS204944 |
|---|---|
| Genomic Position | scaffold1239:- 33894-36120 |
| See gene structure | |
| CDS Length | 816 |
| Paired RNAseq reads | 31 |
| Single RNAseq reads | 115 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006403 (4e-06) |
| Best Drosophila hit | Sur-8, isoform B (7e-13) |
| Best Human hit | leucine-rich repeat-containing protein 58 (5e-16) |
| Best NR hit (blastp) | PREDICTED: similar to CG11099-PA [Apis mellifera] (7e-19) |
| Best NR hit (blastx) | PREDICTED: similar to CG11099-PA [Apis mellifera] (2e-19) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL17882 |
Nucleotide sequence:
ATGGATTACAAAAATAACACAAATACAGTGCTACATTGGAACTACAGAGGTTTCACAGAA
TTCCCAATAGAGTATCTACGAGGCGGAGTAGCCGAGATAACGGATATTTATCTAAAGGAA
AATTTAATATCTCGTATACCGAGTGATATTTGTAAACTGGATAACCTAGAAAGCTTGTAT
CTGAGCGGCAATGACATTACAGAACTGCCGAGAGAAATATCGAAGTTAGGAAGACTGAAG
TGTTTGGACCTCAGTGGAAATAGATTGAGATGTGTCCCGGACGAAATAGGTGATATGGGA
AGCCTAAAATTTCTTATACTGGACGAAAATGAGCTTAGGGAAATACCGTTAAGGATAGCC
GAATTGCGAATGCTTCGTTATCTTTCGGTTTGTGATAATAAGCTAGAATGGCTACCACAA
AAACCCGTATACAATTATTATCATTGCGAATTCAGATTTTGGCGAAACTCCAGTTTGAAA
TTTATACCTTATTCGCTTTGGTATCATATGTTCAGAGAACAACAGACGAGAAGTCTTAGT
ATTGGAAAAGGCTATTGCACGCCTTCTGACATTATAGAAAATGAATTTTATTATTTACCA
AGATTTATAAAAGAAGATTTATGCAACGGGCCCATATCGAAATGTGAAAATGTGAATTGC
AAAAAATCCATTTTTGACTATGTCTACTTTGAATTCTGTTTAGAAAAAATTATTCTCATT
GAAAACACGGAAGAGGTTGTTCTCAGTGCTGCGTTATGTTCGAAAACTTGTGCAGAAAAA
TGGAGAATGGGAAAAGCTGTTATTAATTGGACATAA
Protein sequence:
MDYKNNTNTVLHWNYRGFTEFPIEYLRGGVAEITDIYLKENLISRIPSDICKLDNLESLY
LSGNDITELPREISKLGRLKCLDLSGNRLRCVPDEIGDMGSLKFLILDENELREIPLRIA
ELRMLRYLSVCDNKLEWLPQKPVYNYYHCEFRFWRNSSLKFIPYSLWYHMFREQQTRSLS
IGKGYCTPSDIIENEFYYLPRFIKEDLCNGPISKCENVNCKKSIFDYVYFEFCLEKIILI
ENTEEVVLSAALCSKTCAEKWRMGKAVINWT