New model in OGS2.0 | DPOGS200071  |
---|---|
Genomic Position | scaffold2421:- 23746-30488 |
See gene structure | |
CDS Length | 1917 |
Paired RNAseq reads   | 10035 |
Single RNAseq reads   | 24784 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004592 (0.0) |
Best Drosophila hit   | calsyntenin-1, isoform B (9e-92) |
Best Human hit | calsyntenin-2 precursor (5e-64) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP007103-PA [Tribolium castaneum] (3e-169) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP007103-PA [Acyrthosiphon pisum] (1e-145) |
GeneOntology terms    | GO:0016339 calcium-dependent cell-cell adhesion GO:0005887 integral to plasma membrane GO:0005509 calcium ion binding GO:0007268 synaptic transmission GO:0007156 homophilic cell adhesion GO:0005576 extracellular region GO:0045211 postsynaptic membrane |
InterPro families    | IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR008985 Concanavalin A-like lectin/glucanase |
Orthology group | MCL10738 |
Nucleotide sequence:
ATGTGGGAGCTACCAGCAGCCATGATGGATGCAACTTATAACTCGCGGCTGTCAACAATG
ATTATAAAGATAGTTATTGGTCGTGACGGCGAGCAGTTGTTCGAGTTCGACGGCGAGACA
TCAGCCGTTGTACCAGAATCAATACTACCACATTCCCTCGGCAGCACTTTCTCCGTCAGC
ACCTGGCTAAGACACGCCCCGCCCCCAGACCACGATAAGCACCGCAAGGAACACGTGCTG
TGTCTCGCCGACGACCACAAAATGAATCGTCACCACTACGCGCTGTTCGTCCGCAACTGT
CGTCTGATACTTCTTCTGAGACGTGACTTCGGTGAAGGTGATCTGAACATCTTCAGACCA
GCCGAGTGGAGGTGGAAGCTGCCAGAGGTGTGCGACAACGAGTGGCATCACTACGCTATC
AACGTGCGCTTCCCCAACGTAGAGCTGTACGTGGACGGTGAGCCGTACCGCGGCGAGAGG
GGCCCGGAGGTCATCGACGACTGGCCGCTGCACCCGGCTCACGGCGTCAACACCACCATG
GTAGTGGGCGCCTGCTGGCAGGGTACGGAGAGTGATATGAAGCACCATCTCCGCGGTTGG
CTGGCGGGGCTCGGAGCATTGCCGGGGGCTGTTCAGCCGGCAACGGCGCTGAGATGCGCG
GCCCGCTGTAGAGAGGGACTCAGTCTAGCGCCTGATCTATATCTGAAGTCGGTGTCCGTG
GAGGGTGACAGCGCCTCGGAGGTGGAGACCTTAGTGAGGCGGGTGGCGTATGGAGACGCC
AGGGTGTTCCCGACGCCTGGAAGACGAAACGTACACCTGGCCACCACTATCACTTGTGAT
AACGGCCGAGTCATCAAGGCCCGCCCGGCCGAGTCCTACGTGATGGTGCTCGCGCCTCAG
ACGCCCACCATCCTGCTGAACGGCAGTGCGGATGCTGCTCGCGACTACGCACACTTCAGG
GCAGGCCTGCCGGTGTTCCCTGATATAAGGGTGAGGGTGCTGGCCAGGAGCGGGGACGAT
ATCAAAGAAGCGGAAACACAGAAGCTAGATTCGTGCGTGGTGTCGGTGTACCCCGCCCTG
AACCCAGACCACGAGGCGTTGGCGCTGAAGAGCACGCCGGCCGACGACATCAGAGCGACC
CTCACCAGGGACGGAGTCAGTCTTACAGGAGCTGATACGGTAGAAAACTACCAACAGGTG
TTAAGAGAGATAGAGTACAGCAACAAGAAGCCCGCCTACTACCTCAACAGGGTGTTCAAA
CTGACGTGCTCCGAGCTCAACGGACGGTTCACGAGCAACGAATACGTACAGACGCTGACG
GTGGAGCACCCGAGGGCGGCGTCGGACACCCGGGCGCTCCGCCCCGCCGGACTCGCAGAC
AAAATGGACGTCGTTAGGGAACATACCAGCAACAACATAGAGCCCGCCGTGGCTATGAAT
GTGCCGCGGGCGTTTGCATCACACTCGCAGCACTCGCAGCACGCGGCCGAGATCCCGGCG
GCGCGGGTCCTGGACCTGCACGAGCGGCACAACTCCAACAATGTGGCAGTGGTGATAGGA
GCGGTGATGGCGGGCGCGGTGGTAGCTCTCGTGGTGGTGGTCGCGGCCCGCCTGCGAGCC
GCCAGGCCTTCGCCCCTGGCTAGGCCTTCGCCCCGACCCCGCCCTCTACGAGCTAATGAC
ACAGAAATGGCTTGGGACGACTCCGCCCTCACCATCACCGTCAATCCGATGGAGGAGGCT
ACTGAGTGCGTCGTATCTCCTAGCCGAGTGTGTGAAGACAGTTCCTCGGCGGAATCCTGC
TCGGATGAAGACTCCGATCACCACGACTCCTCCGACGAAGAAGGAGAGGTGATGGCCGGC
AAGCAGCACAAGTACAGGAACATCAGCCAGCTCGAGTGGGACAACAGCACTATGTAA
Protein sequence:
MWELPAAMMDATYNSRLSTMIIKIVIGRDGEQLFEFDGETSAVVPESILPHSLGSTFSVS
TWLRHAPPPDHDKHRKEHVLCLADDHKMNRHHYALFVRNCRLILLLRRDFGEGDLNIFRP
AEWRWKLPEVCDNEWHHYAINVRFPNVELYVDGEPYRGERGPEVIDDWPLHPAHGVNTTM
VVGACWQGTESDMKHHLRGWLAGLGALPGAVQPATALRCAARCREGLSLAPDLYLKSVSV
EGDSASEVETLVRRVAYGDARVFPTPGRRNVHLATTITCDNGRVIKARPAESYVMVLAPQ
TPTILLNGSADAARDYAHFRAGLPVFPDIRVRVLARSGDDIKEAETQKLDSCVVSVYPAL
NPDHEALALKSTPADDIRATLTRDGVSLTGADTVENYQQVLREIEYSNKKPAYYLNRVFK
LTCSELNGRFTSNEYVQTLTVEHPRAASDTRALRPAGLADKMDVVREHTSNNIEPAVAMN
VPRAFASHSQHSQHAAEIPAARVLDLHERHNSNNVAVVIGAVMAGAVVALVVVVAARLRA
ARPSPLARPSPRPRPLRANDTEMAWDDSALTITVNPMEEATECVVSPSRVCEDSSSAESC
SDEDSDHHDSSDEEGEVMAGKQHKYRNISQLEWDNSTM