New model in OGS2.0 | DPOGS213066  |
---|---|
Genomic Position | scaffold587:+ 65489-70274 |
See gene structure | |
CDS Length | 639 |
Paired RNAseq reads   | 619 |
Single RNAseq reads   | 3320 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007683 (8e-83) |
Best Drosophila hit   | sclp, isoform A (6e-45) |
Best Human hit | leucine-rich repeat-containing protein 20 isoform 1 (5e-14) |
Best NR hit (blastp)   | death-associated small cytoplasmic leucine-rich protein SCLP [Manduca sexta] (1e-108) |
Best NR hit (blastx)   | death-associated small cytoplasmic leucine-rich protein SCLP [Manduca sexta] (6e-107) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families   | IPR001611 Leucine-rich repeat |
Orthology group | MCL12921 |
Nucleotide sequence:
ATGAGGCCTCCCACGGAATATGATAACTCGAGGTTGCCAGCTGAAGCTGAGGAAGGAGAT
CCTAGAGCACCAGCGATGATGATTTGTGCTAGATTAGCTGGAAGAGCCATTATCAGGGTT
GTCGGAAGATGTGAAGACGCACAAGAGAATAGAGAATTAGATTTATCAGAGTGCCAGCTA
ATGCAGGTTCCAGACGCGGTATATCACCTGATGCGACACACAGAACTCAAAAGCTGTGAT
CTCAGTGGCAATGTCATCACAAAAATTCCACCTAAATTTACAGTTAAATTTAGTTTAATT
ACAGATCTAAACTTATCTAACAACCAAATGGGAAGGTTACCAGATGAAATGTGTACACTG
GCCTGCCTGCAGCGGCTCGACATTTCACACAACACATTTGTGGCTCTCCCACCTATTGCC
TTTCAATGCCCCAGTCTGCACACCTTATTAGCACACCACAATCAAATTATTGAAGTGGAT
GTCGACAGATTAGCCAGATCTCGTGCTTTGGAGTATGTTGACCTCAGTGAAAATCCCATA
CCTCCTAGAACCTATGAAGAGTTGAAGCAGCTTACAAGACCAACAATATCCATTTCTGAA
AGGGGAAAGGAAGATTGGGAGGAAGATCTTATACTATAA
Protein sequence:
MRPPTEYDNSRLPAEAEEGDPRAPAMMICARLAGRAIIRVVGRCEDAQENRELDLSECQL
MQVPDAVYHLMRHTELKSCDLSGNVITKIPPKFTVKFSLITDLNLSNNQMGRLPDEMCTL
ACLQRLDISHNTFVALPPIAFQCPSLHTLLAHHNQIIEVDVDRLARSRALEYVDLSENPI
PPRTYEELKQLTRPTISISERGKEDWEEDLIL