| New model in OGS2.0 | DPOGS201322 |
|---|---|
| Genomic Position | scaffold1644:- 37442-39465 |
| See gene structure | |
| CDS Length | 1686 |
| Paired RNAseq reads | 90 |
| Single RNAseq reads | 236 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003115 (0.0) |
| Best Drosophila hit | CG6947 (3e-15) |
| Best Human hit | ND |
| Best NR hit (blastp) | chitin binding peritrophin-A, putative [Pediculus humanus corporis] (1e-75) |
| Best NR hit (blastx) | chitin binding peritrophin-A, putative [Pediculus humanus corporis] (2e-87) |
| GeneOntology terms | GO:0016490 structural constituent of peritrophic membrane GO:0006030 chitin metabolic process GO:0008061 chitin binding GO:0005576 extracellular region |
| InterPro families | IPR002557 Chitin binding domain |
| Orthology group | MCL16791 |
Nucleotide sequence:
ATGTCTGCGCGTGCGCCCGCCAGCACCAGTGTGTTCGTGATCACCACGACCGCGCTCGCC
GCCGCCGCATTACTACCACACGGAAATGACATCGTGTGTATTAAGGATGGTCTCAGAGCA
GACTACTCGACGGAGTGCCAGGAGTATGTGCGCTGTTCGGACGGAGTAGTGAAACAGCGT
TACGCTTGCGGACCGGGACGTCTGTTTAGTGAAATAGCCGGGGCTTGCGTGTTGCGTCGA
CGATACTCCTGTACCCGTAAGGTATGCGCTCCCGGAGACACGTTCGCCTATGCTACACCG
GCAACTGCCTGCCGTCACTATTACCGCTGTGAGAACGGAACGGCCATCGATCACGCCTGC
CCACCGGGATCCTGGTTCGACTTAGCGAGGCAGGCCTGTTCCCGGGGGGCCGGGACTTGC
TACGAACCCGTCTGTGCTGGATTACCGGATGGCGTGTTCCCGGACACCTCTCACGAATGT
CGAAGAAAACTGCGATGCCAGGGTGCGGAACTGCGTGCCGTCAGCTCGTGTGTGGGACCG
TGTTCAGACACCTGTCCTCCGCCACGATCTGCAGCTGTTCCTCTACCGGCAGGAGACGCA
GACTTCTGTTCAGATGAAACTTGTTCTTCATTTTGCCAACAAAAAGCGAACGGAGCTTAC
GCAGATCGATCGACCGGATGCCGTGAGTACTTCGTGTGTGAATCGCGGCGAGTCATACGG
CGAGGAGTCTGCGAACCTGGGCTATTGTTTTCCGGAAGCGGATGTGAACCAGCAGCTCAA
AGCTATTGCCCTCCACCTGCCCGAAGTCCTTGCTTTAATAGACCGAACGGCCTATACAGG
GACTGGATTGATTGTTCGTCTTGGTACGAATGCTACCGTGAAAGAGTAACCGCTCGAGGC
ACGTGCGAAGCCAACTTTGTGTTTGACGGTTTCGGCTGCGTTCCGAAAGGGGATTTTTTC
TGTGAAGGACCCGCAATGGCTTCAGAATGCGAGGGTATGCCTAGTGGGACATATCAGGAC
CTGGGATCGAACTGTACCAAATACTACCACTGCGAGGGTTCGTTACGTACGATTCTATCC
TGTCCGGAAGGCCAGATTTTTGATGGAGCAAGATGCTCCTCAGAATCTCAGTCTTTGTGC
CCGAGTCTAGAACCAGATTCCTGCTACGGCCGCTCAGACGGCCGTTACCGTTCCTCCGAC
ACGGGTTGTCGCGGTTTCTATTCATGTATCAATGGACAGAAGGCGGTGTACGCCTGTCCA
GTGGGCAAGGCGTTCGACGGTGACACGTGCGTCTCGTTTCACCCTTCAGTGTGTCCACGC
GACGACTACTCATGTTCCACTCTCTCGGATGGATATCACGCAGAACTGGAGTCTAACTGC
CGCAGATACTTCTACTGCGAGGGCGGCGACAGATTAGCGACAAGGTCCTGCCTCGGCGGG
AAGATATTCGACGGTCACACGTGCGTCGAACCCTCACAGCACACCTGCGGGGCTCCGAGG
AGGAGTACCTATGAGAACGGCGGCAAGACCTGCGAATCCGAAGGTTTCTTCGTGCAGTTG
GGCACTGAGTGTAAAAAGTACTATTTCTGTTTGACCGGCATAAGGACGAGCCTGTCTTGT
TCGGCGAGACAGCTGTTCAATGGGCAAGTCTGCGTCCCCGAAGAACAGTACACCTGTCCA
GGCTGA
Protein sequence:
MSARAPASTSVFVITTTALAAAALLPHGNDIVCIKDGLRADYSTECQEYVRCSDGVVKQR
YACGPGRLFSEIAGACVLRRRYSCTRKVCAPGDTFAYATPATACRHYYRCENGTAIDHAC
PPGSWFDLARQACSRGAGTCYEPVCAGLPDGVFPDTSHECRRKLRCQGAELRAVSSCVGP
CSDTCPPPRSAAVPLPAGDADFCSDETCSSFCQQKANGAYADRSTGCREYFVCESRRVIR
RGVCEPGLLFSGSGCEPAAQSYCPPPARSPCFNRPNGLYRDWIDCSSWYECYRERVTARG
TCEANFVFDGFGCVPKGDFFCEGPAMASECEGMPSGTYQDLGSNCTKYYHCEGSLRTILS
CPEGQIFDGARCSSESQSLCPSLEPDSCYGRSDGRYRSSDTGCRGFYSCINGQKAVYACP
VGKAFDGDTCVSFHPSVCPRDDYSCSTLSDGYHAELESNCRRYFYCEGGDRLATRSCLGG
KIFDGHTCVEPSQHTCGAPRRSTYENGGKTCESEGFFVQLGTECKKYYFCLTGIRTSLSC
SARQLFNGQVCVPEEQYTCPG