| New model in OGS2.0 | DPOGS202368 |
|---|---|
| Genomic Position | scaffold3253:+ 4858-9603 |
| See gene structure | |
| CDS Length | 906 |
| Paired RNAseq reads | 66 |
| Single RNAseq reads | 167 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013790 (5e-50) |
| Best Drosophila hit | CG13442 (5e-17) |
| Best Human hit | E3 ubiquitin-protein ligase MARCH1 isoform 1 (1e-08) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009907 [Tribolium castaneum] (6e-19) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009907 [Tribolium castaneum] (8e-21) |
| GeneOntology terms | GO:0008270 zinc ion binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR011016 Zinc finger, RING-CH-type IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | MCL40897 |
Nucleotide sequence:
ATGGAAGAAAAGGAAAAATCTAATAAGGATGAAGAATCGCCGAAAGAAGAGATAAAAACA
AGAGACAAAATCATCAACAACACTCAGGATGCTGGACCATCAAGAGTAGTAAATCTGCCA
GGAGCTATACAGCACAGTCCAAGGAACTTTATCACAGGGAGATCCAAATCCGAGCACAGC
ATTAAACCTTACATCACAAGTGCAGATGTGGCCAACGCTTTGAAAATAACGTCTCTAAGT
TTCGGCAACCAAAATCAGACCACAGACAGGGAGCTGAAAATACCAATGCTAGATAAGAAT
GATGATAAAGAAGACGCAATAACATTCATAGAACTGAAAAAACTTATGGCCTCTTGTTTC
AAAATAAGCAAAGACACTAATGAAATAGCAAACGTGAACGTTCACACCGCTATCAGTGGT
ATAACAAATGACTTAGTCCACAGCATTCCGAATGTGAGCCTGAATAAGACGGATGTAAAT
GACGTAGTCGTTACCCAAGATTCCAGATCGAATAGAGCGTCTGAAGGTAGGAAGAAGAAC
TCGGGAAATCTATCAGAGAAATCGGATTTATTGGCTCAAAGAGATTCCTTATCGAGCATT
GGATCTAACGTGTGTAGAATTTGTATGACGAGGGGCAAGGAGAGATTGATTTCTCCTTGT
AACTGCAAGGGTTCGCTGGCCAATGTTCACCTGTCTTGCCTCCAGCGTTGGCTCAACCAG
GTCGGAAGGAATCATTGCGAGCTCTGTGGTTTTAGCTACCCGGCCATCCGCACTCCGAGG
TACACCGTACTCCAGGCCCTGAGACTCTGGTTCTGCAACCCTCGTAACAGAAGTCACCTC
CAGGTAATTCATTGTGAATATATTCTCGAACTGTATTCTATTCGTTCCTTCCTCGTCTTA
AAATAG
Protein sequence:
MEEKEKSNKDEESPKEEIKTRDKIINNTQDAGPSRVVNLPGAIQHSPRNFITGRSKSEHS
IKPYITSADVANALKITSLSFGNQNQTTDRELKIPMLDKNDDKEDAITFIELKKLMASCF
KISKDTNEIANVNVHTAISGITNDLVHSIPNVSLNKTDVNDVVVTQDSRSNRASEGRKKN
SGNLSEKSDLLAQRDSLSSIGSNVCRICMTRGKERLISPCNCKGSLANVHLSCLQRWLNQ
VGRNHCELCGFSYPAIRTPRYTVLQALRLWFCNPRNRSHLQVIHCEYILELYSIRSFLVL
K