| New model in OGS2.0 | DPOGS206255 |
|---|---|
| Genomic Position | scaffold1331:- 17096-21373 |
| See gene structure | |
| CDS Length | 2382 |
| Paired RNAseq reads | 766 |
| Single RNAseq reads | 1997 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001457 (3e-24) |
| Best Drosophila hit | Caf1-180 (1e-27) |
| Best Human hit | chromatin assembly factor 1 subunit A (6e-20) |
| Best NR hit (blastp) | PREDICTED: similar to Caf1-180 CG12109-PB [Acyrthosiphon pisum] (3e-57) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL012725 [Aedes aegypti] (2e-47) |
| GeneOntology terms | GO:0005678 chromatin assembly complex GO:0006334 nucleosome assembly |
| InterPro families | IPR022043 Chromatin assembly factor 1 subunit A |
| Orthology group | MCL30219 |
Nucleotide sequence:
ATGAAAACTCCGAAGTCATCAGATAGTGAAGAAGTAACACCATCAAAAAAAGTTTTGAAA
CAAGCTCGTCTTCCATTCAAGTTATTAAGTGAAGTATCTCCAAAATCAGTGACTCCACCC
TCTAGGAAGCGAAAGCTATCTATTCCTGACCCGGAACCAGTCTCAAAGATTGGCAAAATA
GTGAATGATAAGGAAGTATGTGCTGAAACAGTAGTAATAAGTGATGATGATAGTAAGGAG
TCTGTACAGAATTTAAAAGCTGCAAAATCTCTCAATCCATTGGTAAAATTAGTAGATATT
GCTAGAAAAAAAAAGCTACAGAAATCGAAAAATTCCAAAAAAAAGAGAAGCTCTCCAAAA
AAATCAGTTAACGGTTCTTTAGAAAATCATGAGAATGGTAATAATGAAAACACCGATAAA
ATTGAAAAGGAGGAAGCTATGGATGTTGATGTTGAGATAGAAACTGAATCTAAAAATCAA
GATGAAGATAATGTATCGAGTAACCATGATGTTACTGAAGACAAAGATGTTGATACTACT
GGAATTGATGAAGACAGTGATAAAACTTCAAATGAAATTGAAGACAATGAGTTATCTACT
TCAAAAGACGACCAGATTTCAGTCCAAACTAACAATGATGCATCAATACAAGAGCTTACC
AGTGGCAAAAAATCCAAAGTAAGTGTAACCCCTAAAAGAAGTGTGAGAAACAAATCAAAA
ACTGATGATAATCTGAACACTTCGAAAATCAGTAACTGTGATGAATCCCTAAGTTCACCG
TCAACACCACGACGATCAGGAAGGAATATATCAATGAATAATAGCCAAGGGGACACTTCG
ATTACTGAAAGTGCCAACACTAGTGTTACACCAAAACAATTACAAAAAAAGCTTGAGTCA
GCTAAAAAGAAAGAAGAAAGAGAGAAAGAAAAATTAGAAAGGGAAAGGAAAAGGCAACAA
GAAAAAGAGGATAGGATTAAACAAAAGCTAGAAAAAGAAGAACAAAGGAAAAAGGAAAGA
GAGGAAAAAGAAGAGGCTAAGCGAAAGGAAAGAGAAGAAAAAGAAGAACAAAGAAGAAAA
GAAAAGGAAGAAAAAGAGAAACAAAAGGAACTTGAAAAAAAGTTAAAAGAAGAAAAAGAA
GAGCAGAAACGTAAAGAAAAGGAGGAAAAAGAAGAACAAAGAAAAAGAGAAAAGGAAGCT
AAAGAGGAAGAGAAGAGAAAGCGACAGGAAGTTTTAGAACAGGAGAAATTGGAACAGGAA
CAGAAGAAGAAAAAGGCAGCAGAGGCTTTTGCCAGCTTTTTTGTTGCAAAGCAAAAAAGT
GAAAAGGACCAAGTCACTATTGGACCCATGAGAAATAACATGTTATCAAGTTTCACAATA
AAATCTGACATGAGATTAGCGCCTATTGTAAGAAATCAGTTACAAGAAGATTCTAAAAAG
GAATTGGATACATTTCTTGGAAATCAAAATGTTCCAGAAAGTTCCTTATATTTAAAAAAC
TTGAAGGAAAGGAAGCCATTGTCAAGTGGTAAAACATGGCCTCCGTGTGATAAAAATGAT
GATGATGTCATGATAGTTGAGGATGAACTACCACCAGCGGATGGCATCGGTGAGATAATT
TCATGTGAACCAGTTAATCAGGAGAAACTTCGTCCTAAACTGCTTTCATTCCATGAAAAC
AGACGTCCTCCATACTGGGGTACCTGGAGGAAGAAAAGTTCATCAATCAATCCAAGAAGA
CCTTTTAAAACTGATAATAAACTGTTGGATTATGAAGTGGATAGTGATGAAGAGTGGGAG
GAGGAACAGGAAGGAGAGAGTATTGATGGCAGTGCAGCGGGAAGTGACGATGAACAAGAA
GCAGATGAATATGAAGTTGATAATGAAGTGTTTGTACCGCATGGCTACTTGAGTGATGAG
GAGGCAACAATGGATGAAGACGATGTACTTTCACTCTCACCGGAAGCACAAAAAGCGAAA
TTGAAGTATCTAGAAGACGAATTTGAGTCTGAAATGAAAAAGCCAATGGAAAAATTAAAG
CCTAGGTTATATGGGCTGTTGTGGGAGAAACCGGAAGGAGGAAAACCCGAAAACTGCGCT
GAGGCTCTATGGAATTACATTTCGAAGTTCTCGATGATAATCGATCCATATCCAGTACTA
CAACCAGCCCTAGAAGTGGAAGAACCCGAAAAGAAAAAGACCAAAAAGAAAAAGAATCCC
GAAGGAGAAAACAAGAGTCCTAAAACCGATAAAAAGAAAAAATCCAAAAATGACGATAAA
GATCCAAAAAACACTAAAACTGAGGCCAAAAAGACTGTGACAGACCCAAAAAAGAATCAG
CCCGGCATAAATTACTTTCTGTCAAAATTAAAGACTTCATGA
Protein sequence:
MKTPKSSDSEEVTPSKKVLKQARLPFKLLSEVSPKSVTPPSRKRKLSIPDPEPVSKIGKI
VNDKEVCAETVVISDDDSKESVQNLKAAKSLNPLVKLVDIARKKKLQKSKNSKKKRSSPK
KSVNGSLENHENGNNENTDKIEKEEAMDVDVEIETESKNQDEDNVSSNHDVTEDKDVDTT
GIDEDSDKTSNEIEDNELSTSKDDQISVQTNNDASIQELTSGKKSKVSVTPKRSVRNKSK
TDDNLNTSKISNCDESLSSPSTPRRSGRNISMNNSQGDTSITESANTSVTPKQLQKKLES
AKKKEEREKEKLERERKRQQEKEDRIKQKLEKEEQRKKEREEKEEAKRKEREEKEEQRRK
EKEEKEKQKELEKKLKEEKEEQKRKEKEEKEEQRKREKEAKEEEKRKRQEVLEQEKLEQE
QKKKKAAEAFASFFVAKQKSEKDQVTIGPMRNNMLSSFTIKSDMRLAPIVRNQLQEDSKK
ELDTFLGNQNVPESSLYLKNLKERKPLSSGKTWPPCDKNDDDVMIVEDELPPADGIGEII
SCEPVNQEKLRPKLLSFHENRRPPYWGTWRKKSSSINPRRPFKTDNKLLDYEVDSDEEWE
EEQEGESIDGSAAGSDDEQEADEYEVDNEVFVPHGYLSDEEATMDEDDVLSLSPEAQKAK
LKYLEDEFESEMKKPMEKLKPRLYGLLWEKPEGGKPENCAEALWNYISKFSMIIDPYPVL
QPALEVEEPEKKKTKKKKNPEGENKSPKTDKKKKSKNDDKDPKNTKTEAKKTVTDPKKNQ
PGINYFLSKLKTS