| New model in OGS2.0 | DPOGS205370 |
|---|---|
| Genomic Position | scaffold100:- 74699-77144 |
| See gene structure | |
| CDS Length | 2082 |
| Paired RNAseq reads | 49 |
| Single RNAseq reads | 169 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008766 (8e-35) |
| Best Drosophila hit | crooked legs, isoform A (3e-22) |
| Best Human hit | zinc finger protein 208 (6e-35) |
| Best NR hit (blastp) | PREDICTED: zinc finger protein 347-like [Bos taurus] (1e-42) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 347-like [Bos taurus] (4e-53) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005622 intracellular GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL24960 |
Nucleotide sequence:
ATGTCATTGCTTAAAGAGCCGCTGTCACTTGATGATTTAATTTTTGAAGACGAAAACGAC
TCGACATCGGTAACTGTAAGCGTAAAACTTATAAATCCGAAACATCGCTACGTTGTTAAG
GCAAATGATACATCGATTTCGCAAATCTGGGAGCAAAATGCCCTTACGTTATTTGAATTC
TCTCATGTCTATCCGTTTATCCATGTGTGTAATAAATACAAATGTTTGGTTTGCTCTCTT
GAATTTATAGAAGCAGGTCTTTTAAAGACACATCTAACAAGTCACAGTACGTCTGATTTG
AAATGCGAACTAAGGAACAAGGTACGTGATGGAGTAATTAAAGTTGACGTGTCTTGTCTG
ATGTGCAAGATTTGCCAGTCATGTCCGCCAAATCTGTCCGCGTTGAAGGTACATCTGAAA
GATCACGGGAAATCTATTGAACCAGATTTTCAAGATAATATTATACCGTTCAAACTAGGC
GGTGATTTATTTGAGTGTCAAATCTGTTGTGAACCTTTTTCTAAACTACGATCGATAATA
ATACACATGAGCAAACATTTCAATAATTTCAGTTGCGAATTTTGTGGAGCAGTTTTTATA
ACTCTCCGTCTGCTAAAAAGACATTTACAGACGCACAAAAGCGGCCATTATCCGTGTATG
AAATGTGATAAAGTCTTCAGTAGTGCCAACAAAAGAATACATCATTCTAAGAATGTTCAC
CTTAAGAAATACCCACGAACATGTGAAACATGCGGGAGGGAATATGAAATGAAGAGTCAA
TTGCTAATACATATAAGATCAGTGCACATGCAAGAAAGAAATCAAGAGTGTAGCGTCTGT
TTGTCCAGGTTCTTCTCAAAGAATAGCCTGTCCCGACATATGACGATCCATACGGGGAGT
AAAAATTACAAATGCGATATATGTGGAAAGGAATACGCGCGACAGAAATCCATACCCGGA
ACACAGCGACCAACACCAAGAACCAGCATCTGGCAAATGACTATATACGAACGGCTTAAT
GCTGCAACGTTTCTTGAGTGCACCACGATCAGGCCGTTCTTTTACCAGCAGGCTAATTTC
AAGTGCTTCTATTGCACAGAAGTTTTCCCAGAAATTAATTCAGTTCTCAATCACACCAGC
TTCCATTCTGTGCCCGAAAGGTCGACTCTATTGAAACAACACTTAAGAAAAGGCAAAAGG
GTTATAAAGGTAGACATATCCAATTTAAGATGTCGACTGTGTGAACAAAAGCACTTGGAT
CTGGACGATATCAGAAAACATTTAGCTTCAGTCCATAAAAAAGATTTCAATTCTGCTGGT
AATGGTCTTATGGCTTATAATTTAAATTTATCGAACGGTCTTCTTTCGTGCCATAAATGT
GGAAAGACCTTCAACTCATTTTTCCTCCTCAACCGACACATGAACGTGCATTTCAGTGTT
GTGTGCGAAACTTGTGGATTAGGTTTTATATCACACCAACGTCTGATAAACCACAGGATA
GTCCATCAAAACGGCGTTCACAAGTGCGACAAATGCCAAGAGGTTTTCCCTACAAAACTG
AAGCTAAGGTATCATATATTCAAAAAGCACGAAGTAAATGCGAAACGCACAAAACCTCTG
AAATGTCCGCACTGTTTAGAAAGGTTTGCTGAACATTATAGGAAAATGACGCATTTAAAA
GAGGTTCACGGGATCACATTCACGTTCGAGTGTCAAGTGTGCAAATCGGTGTTCCCAACA
AGAAGGGCTCTAACTGAACACACAACAAAACAGCACACACAGAAAATACAATGCAAAGTA
TGCGGTAAATGTTTCGGTACTAAATCACTATTAAAGATGCACATGCGAGGGCACACGGGA
GAGAGAAATTTTTTTTGCAGCATATGTCAGAAAGCTTATATGCACGAGCGGACGTTAAGA
CAACATATGCGGGTCCACGGACCAGTTTGGAAATTTACTTGTTCTGAATGTGGTAATGGC
TTCCACAATCGCAACGATTATAACAAACATATAAAACAATGGCACCCTCAGTGGCAGTTC
AGAACTATCGTGAAGAATTTTGGTACAGAAACTGTTATGTGA
Protein sequence:
MSLLKEPLSLDDLIFEDENDSTSVTVSVKLINPKHRYVVKANDTSISQIWEQNALTLFEF
SHVYPFIHVCNKYKCLVCSLEFIEAGLLKTHLTSHSTSDLKCELRNKVRDGVIKVDVSCL
MCKICQSCPPNLSALKVHLKDHGKSIEPDFQDNIIPFKLGGDLFECQICCEPFSKLRSII
IHMSKHFNNFSCEFCGAVFITLRLLKRHLQTHKSGHYPCMKCDKVFSSANKRIHHSKNVH
LKKYPRTCETCGREYEMKSQLLIHIRSVHMQERNQECSVCLSRFFSKNSLSRHMTIHTGS
KNYKCDICGKEYARQKSIPGTQRPTPRTSIWQMTIYERLNAATFLECTTIRPFFYQQANF
KCFYCTEVFPEINSVLNHTSFHSVPERSTLLKQHLRKGKRVIKVDISNLRCRLCEQKHLD
LDDIRKHLASVHKKDFNSAGNGLMAYNLNLSNGLLSCHKCGKTFNSFFLLNRHMNVHFSV
VCETCGLGFISHQRLINHRIVHQNGVHKCDKCQEVFPTKLKLRYHIFKKHEVNAKRTKPL
KCPHCLERFAEHYRKMTHLKEVHGITFTFECQVCKSVFPTRRALTEHTTKQHTQKIQCKV
CGKCFGTKSLLKMHMRGHTGERNFFCSICQKAYMHERTLRQHMRVHGPVWKFTCSECGNG
FHNRNDYNKHIKQWHPQWQFRTIVKNFGTETVM