| New model in OGS2.0 | DPOGS205374 |
|---|---|
| Genomic Position | scaffold100:- 18943-23594 |
| See gene structure | |
| CDS Length | 1566 |
| Paired RNAseq reads | 1571 |
| Single RNAseq reads | 3920 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008775 (1e-33) |
| Best Drosophila hit | mediator complex subunit 28 (2e-15) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 28 (2e-11) |
| Best NR hit (blastp) | PREDICTED: similar to mediator complex [Tribolium castaneum] (6e-31) |
| Best NR hit (blastx) | PREDICTED: similar to mediator complex [Tribolium castaneum] (3e-22) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex |
| InterPro families | IPR021640 Mediator complex subunit Med28 |
| Orthology group | MCL16274 |
Nucleotide sequence:
ATGGATGATGATGAGATGACTATGGCAGAGGGAGACTTAGACATGATGACGTCAATGAAG
AGACCTATGATGCCTTTAGACCCAGACGACACACAACTAGACGCTCTCGAAGATATCTGG
CTGAAGGGAGATGAGATGGACCCATCAGAAGCGCAGCTACCCGACATTGGATACATAGAC
TCAGACAGAGATTCAGACTATAAAGCACCGCAGACAACAAAACGGAAGCAGACAAAAACC
AGGCGAAAACGGAACAGCTCCAAGTCCAAAGAGAAGGTCGCGAGGTCACCACTGAAGGGA
GAATCTAGTCAGGAACAGTCAAAGAAACAGAAGAGAAAGATGAAGACGAAGAAGCTGTCC
GACGAACAGCTGGAAGATATGGCAGCTGTTATATCCACCTGGGAGTCTCCGCCGCACGAT
AACGAAGACGTCAAAGACAAACCACCATCACCGAAAGTGGATCCTCTGAATGAAACGGTT
ACATCACAGAGTTCAGCCTTAGACACGACCACCGAAGAACTGTCAAAAACGACTGACAAA
GAGCCCAAAAAACGTAAATCACTACCCAAAACTGATAAAAAGGATAAAATTAAGAAGGAA
AGAGTCAAAGAGCCAATCAAAAGGGAGCCGAAAGTAAAAAAGGAAAAGGTGGAAGAGGAA
AAAGATAAAAAACCACGCAAACCCAGGATCCCGAAGATTAAACAGGAGATGCCACTGCAA
CCTGATGTTCATAATTCACCCAAGATTTACACCTCCAGCACTTTACCCAGAACCATGGCA
GCCTCTAGTGCATCTACGTCGAAGATTCCACTTCCCCTGAACACCCCACCGAAGCCGTAC
GCTGGCTTGCTTCTAGACGCCAATCTCCGAGTACCCACAATAATACAGCCCATCAACAAA
AACCCGAGCGCCTTCGAGGGCGAGTTCTACAAATTCATGGAAAGGAAACAGAACTCCCCG
GAGCACATCATACCCAGGAAGTCATCCACAGATAAGGTGATAGTTGAAAGAGTGCTTCCT
GAGAGCCCAGTCAAGGTACAAGACATACCATTACCCATCGGCCAGTACAACGACAATATA
TTCCTGGATACTCCAATAGATTACCGGACGCAACCTCCAGCTGGCACCAGAGCCAATCCC
CATCCCAACTACCCATGGAGGCCGACTCAGAGGCAGGGTTCCTCCATCCAGCCGGCATGT
CTGAACGTGCTGACAAAGCAGGAGACGTCTCCGTGTGTTGAGAAGGAGGAGGTGAGAGTG
GAGGTGGAGCGGTTCATTGACCTCGCCAGGCTGATGGAGGCTTTCTTTCTACAGAAAAGA
TTCCTGCTATCAGCAATGAAACCCGAGCTTCTAGTTAAAGAAGACAACAACGAGCTGAAA
TGTGAACTCCAGAGGAAGGAGGAGCTGCTGAGGCGGCATTCAGATAAGATATCTCAGTGG
CAGAATTTGCTGGCAGATTTGCAGGGCCACACGTTGTACAACAAGTGTCAACAACAGCCC
CCGGCACCGGCCCTCCAACAGGCCGCCTCTCCCATGCCGCAGCCCTGTAGTGTCCAATTT
TTTTAA
Protein sequence:
MDDDEMTMAEGDLDMMTSMKRPMMPLDPDDTQLDALEDIWLKGDEMDPSEAQLPDIGYID
SDRDSDYKAPQTTKRKQTKTRRKRNSSKSKEKVARSPLKGESSQEQSKKQKRKMKTKKLS
DEQLEDMAAVISTWESPPHDNEDVKDKPPSPKVDPLNETVTSQSSALDTTTEELSKTTDK
EPKKRKSLPKTDKKDKIKKERVKEPIKREPKVKKEKVEEEKDKKPRKPRIPKIKQEMPLQ
PDVHNSPKIYTSSTLPRTMAASSASTSKIPLPLNTPPKPYAGLLLDANLRVPTIIQPINK
NPSAFEGEFYKFMERKQNSPEHIIPRKSSTDKVIVERVLPESPVKVQDIPLPIGQYNDNI
FLDTPIDYRTQPPAGTRANPHPNYPWRPTQRQGSSIQPACLNVLTKQETSPCVEKEEVRV
EVERFIDLARLMEAFFLQKRFLLSAMKPELLVKEDNNELKCELQRKEELLRRHSDKISQW
QNLLADLQGHTLYNKCQQQPPAPALQQAASPMPQPCSVQFF