New model in OGS2.0 | DPOGS205377  |
---|---|
Genomic Position | scaffold100:+ 1061-12661 |
See gene structure | |
CDS Length | 1956 |
Paired RNAseq reads   | 1121 |
Single RNAseq reads   | 3442 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008776 (0.0) |
Best Drosophila hit   | CG42595, isoform F (2e-152) |
Best Human hit | metal transporter CNNM2 isoform 2 (6e-102) |
Best NR hit (blastp)   | PREDICTED: similar to CG40084-PC.3 [Apis mellifera] (4e-174) |
Best NR hit (blastx)   | PREDICTED: similar to CG40084-PC.3 [Apis mellifera] (3e-167) |
GeneOntology terms    | GO:0006811 ion transport GO:0016020 membrane GO:0016021 integral to membrane GO:0006810 transport GO:0005886 plasma membrane GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
InterPro families    | IPR014710 RmlC-like jelly roll fold IPR018490 Cyclic nucleotide-binding-like IPR000595 Cyclic nucleotide-binding domain IPR000644 Cystathionine beta-synthase, core |
Orthology group | MCL10748 |
Nucleotide sequence:
CTCCAGGTTACTACGGACGTCAACGACCTGGATAAGGACGAGGTGAACATCATCTCCGGG
GCGCTGGAGCTTAGGAAGAAGAAGGTCTCGGACGTGATGACGAAGTTGGAAGACGTGTTC
ATGCTGCCTATAACGTCTGTGCTGGACTTCGAGACGATGTCCGAGATCGTGAAGTCTGGT
TTCTCCCGTATCCCGGTATACGAGGGCACCCGCACCAACATCGTGACCGTGCTCTTCATC
AAGGACCTGGCGTTCGTCGACCCTGATGACAACACTCCTCTGAGAACCCTCTGCCAGTAT
TACCAGAACCCCTGCAACTTCGTCTTCGAGGATGTCACGCTGGATGTCATGTTCAAACAG
TTCAAAGAAGGTCACAAGGGTCATATGGCGTTCGTCCACCGCATCAACAACGAGGGCGAG
GGCGATCCGTTCTACGAGACCGTGGGTCTGGTGACGTTGGAGGACGTCATCGAGGAGATG
ATACAGGCTGAGATCGTTGATGAGACGGATGTGTTCACGGACAACCGTTCCAAGCGGCGT
CGCAACCGTCCCCAGAACAAGTTGCAGGACTTCGCTGCATTCGCCGAGCGCCACGAGAAC
CAGAGGATCCATATATCTCCGCAGTTGACTTTGGCCACCTTCCAGTTCCTCAGCACCAGT
GTGGATGCGTTCAAGCCGGATACGGTATCAGAAACGGTGCTGCGTCGTCTGCTGAGACAG
GACGTGATCCACTACATCAAGATGAAAGGGAAGAGCAAAAGAGAGGCCAGCACGTACGTG
TACCAACAGGGGAAAGCGGTGGACTACTTCGTACTGATCCTCGAGGGGCGAGTGGAGGTG
ACGGTCGGCCGAGAGAACCTCATGTTCGAGGCCGGACCCTTCACATACTTCGGAGTGCAG
GCGCTCACGCAGAACGTCGGAGTCGCGGAGTCCCCCACGCCGTCCGCGATGGGCTCCCTC
CAGAACATCAACATGGAGGCCATGCTGAGACACACCTTCGTCCCGGACTACTCAGTGAGA
GCTGTCTCCGACCTGTACTATCTGGCTGTTAAGAGGTCCCTCTATTTGGCGGCGAAGAGG
GCCACACTTATGGAAAAGGGGGCCCTGTCGAAAGGCGCCACTAATGAACAGTTCGACACT
GAAGTTGATAAGCGTCTGACAGGACCTTCCGCCCACCAGCTCCGGATCGCTGACGATGAA
GACTTGGAGCAGGGTTTCGAGGTGTCGCGGAACAGTTCGAAGAAGTCGCTGGCTATTGTG
GACAGCGCGAAGAGTTTGCCCACCGTGGAACAGCCCACGCCGTCAACACTGTCGACCAGG
AGCGAGGGGAATATGAAGAAGAAGAATTACTACGCCAAGACATACAAGATCATCATGAAC
AAGAAGGAGGACGACAGGAGCGGAGATCTGATGTACCTGCCCAGCACCTCCAGGGGCTGG
AGGCGAGAGGACACTGAAGAATCCATGAAGGATTCTGCAATGAAAAAAACACAATTCAAG
ACAGAGAAGTCTCTGCTGACTTTCCACGAACACAAAGACAGTGAGCGTCAGCGAGCTGAT
TCCAAAGAAAATGATGGCAAGGAAACGGGAAGAGACGGAGGAGGAGCCGACGATGACATA
AGAGAGATATACAGCGACGGGATAGTCTCGAATACGAGTCTCGCAGACAAAATGAAACCC
ACGAAGGAGAAAATCCCGATCGAAGTTTACGAGGATCTTGGAAACCGCATCAGGGACTCG
GAACAGCTGGTGCTGGCTAAACTGGACGAACTTCTTCAGTCCGTTGACGAAGACATGAGT
ATCAGTGGGGAAAACAAGACTCCATCCAGACAGGTGTCCCCTAACCCGGCGGTGCCGCCT
TCACCGGCGACGCGCGCCTCCTTCTCCCGGATGTCCCCAGACAGGAACGGGGATATATTC
GGAAGAGATGAACAAGAGAAGCTGCTGAAACACTGA
Protein sequence:
LQVTTDVNDLDKDEVNIISGALELRKKKVSDVMTKLEDVFMLPITSVLDFETMSEIVKSG
FSRIPVYEGTRTNIVTVLFIKDLAFVDPDDNTPLRTLCQYYQNPCNFVFEDVTLDVMFKQ
FKEGHKGHMAFVHRINNEGEGDPFYETVGLVTLEDVIEEMIQAEIVDETDVFTDNRSKRR
RNRPQNKLQDFAAFAERHENQRIHISPQLTLATFQFLSTSVDAFKPDTVSETVLRRLLRQ
DVIHYIKMKGKSKREASTYVYQQGKAVDYFVLILEGRVEVTVGRENLMFEAGPFTYFGVQ
ALTQNVGVAESPTPSAMGSLQNINMEAMLRHTFVPDYSVRAVSDLYYLAVKRSLYLAAKR
ATLMEKGALSKGATNEQFDTEVDKRLTGPSAHQLRIADDEDLEQGFEVSRNSSKKSLAIV
DSAKSLPTVEQPTPSTLSTRSEGNMKKKNYYAKTYKIIMNKKEDDRSGDLMYLPSTSRGW
RREDTEESMKDSAMKKTQFKTEKSLLTFHEHKDSERQRADSKENDGKETGRDGGGADDDI
REIYSDGIVSNTSLADKMKPTKEKIPIEVYEDLGNRIRDSEQLVLAKLDELLQSVDEDMS
ISGENKTPSRQVSPNPAVPPSPATRASFSRMSPDRNGDIFGRDEQEKLLKH