| New model in OGS2.0 | DPOGS202958 |
|---|---|
| Genomic Position | scaffold222:- 128706-130401 |
| See gene structure | |
| CDS Length | 879 |
| Paired RNAseq reads | 198 |
| Single RNAseq reads | 689 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005748 (1e-107) |
| Best Drosophila hit | Syntrophin-like 2, isoform B (2e-66) |
| Best Human hit | gamma-1-syntrophin (1e-19) |
| Best NR hit (blastp) | GH23287 [Drosophila grimshawi] (4e-76) |
| Best NR hit (blastx) | GH23287 [Drosophila grimshawi] (2e-72) |
| GeneOntology terms | GO:0008307 structural constituent of muscle GO:0016013 syntrophin complex GO:0008092 cytoskeletal protein binding GO:0005515 protein binding |
| InterPro families | IPR015482 Syntrophin |
| Orthology group | MCL14945 |
Nucleotide sequence:
GCGGACGGAGCTTCAGACACGGACAGCAGTACTGGTGACGAACATCCCTCGCTACACAAC
AAGGTGGACGACAACTGTAACACAGAGAGGAACGCTGACACCAACGGCGGCTGGCAGAGC
GCGTGGGGCGAGTCTGAGGAGAGTCGTCCGGGGAGTGCCGCGGGCTCCGCGAGAGGCTCA
CGGCCTCCGTCCGCCGCGGGGGACGTACAGACATGGGTGGATGTAGTCTCCGTTCCTCTC
ATGATGGGATACGTCACGAGATACGTGTTCGGAACTGACAAGTTACGACCAGGAGCTTTC
GAGGTCCGCGGTGCGAAGCCCCACATGACGTCAGGGGTGATTCACGTGGACGACCCCGCC
GCCCTCTCACAGTGGCTCAAGAGCATCTCGGACAATATCATGGGCCTTACTAACCTCCAG
ATGAAGCTTTTCAACCGTCACCTGAGCGGCGGCGACCGTATAGAGTATATGGGCTGGGCT
CACGAGGGCCTGGTGACGGCCGCACAGCCCTGGCAGACCTACCGACCCAAGTTCCTCATG
CTGAAGGGAACTGACGTCATGCTATTCGACGTTCCGCCGTGTTCGGTGAGCGAGCTGTCC
AAGTGCCCGGAGGTGTTGAAGGTGTATCAGACCATGTTCCGCACTGTGAAGGAGAGCGAG
ACGGTCGACTGGAGGCAGCACTGCTTCTTGGTGCAGAGCTCTGGCGCGCTCGGCGGACCC
GGGCCCAGATACTTCAGCGCCGACACCAGGCACGAGCTGCTGCGCCTCGAGGCCGCCTGG
ACCGCCGCCGTCGTACACGCCGTCTTGAGACTCGGGGTACAAAACACACACACACACGCA
CACAGCATACCCACACATGCAAACGTTGATTATATATAG
Protein sequence:
ADGASDTDSSTGDEHPSLHNKVDDNCNTERNADTNGGWQSAWGESEESRPGSAAGSARGS
RPPSAAGDVQTWVDVVSVPLMMGYVTRYVFGTDKLRPGAFEVRGAKPHMTSGVIHVDDPA
ALSQWLKSISDNIMGLTNLQMKLFNRHLSGGDRIEYMGWAHEGLVTAAQPWQTYRPKFLM
LKGTDVMLFDVPPCSVSELSKCPEVLKVYQTMFRTVKESETVDWRQHCFLVQSSGALGGP
GPRYFSADTRHELLRLEAAWTAAVVHAVLRLGVQNTHTHAHSIPTHANVDYI