| New model in OGS2.0 | DPOGS202958 |
|---|---|
| Genomic Position | scaffold222:- 124252-127402 |
| See gene structure | |
| CDS Length | 480 |
| Paired RNAseq reads | 53 |
| Single RNAseq reads | 294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005749 (9e-30) |
| Best Drosophila hit | Syntrophin-like 2, isoform D (6e-39) |
| Best Human hit | gamma-2-syntrophin (4e-19) |
| Best NR hit (blastp) | GH21243 [Drosophila grimshawi] (1e-41) |
| Best NR hit (blastx) | GH21243 [Drosophila grimshawi] (9e-40) |
| GeneOntology terms | GO:0008307 structural constituent of muscle GO:0016013 syntrophin complex GO:0008092 cytoskeletal protein binding GO:0005515 protein binding |
| InterPro families | IPR015482 Syntrophin |
| Orthology group | MCL39997 |
Nucleotide sequence:
ATGATTGTATTGACGAACGCCACGGGCATATCCTGGAAGATCGCTGGTGGTGTACACCTG
GAAGATCGCCTCGCTCGGTATCGGCATGTGGAACCGCTTGGCCCAGACGCTGTCGCGGTT
GTAGTAGTGAGAGAAGAACGCCGGCACTTGGTAGTGGATAAGAAGACCTTTACCGTGGTC
CACATGGGTCGGGCGGCGGGGCTCACGTTAGACTGGTCGTCGGGGTTCTCTCTCAGTGAG
GGTACTCCCGGAGCGCCTCCCGTATGGTCCTACAGGTTCTCCCAGCTGCGGGGCTCCAGC
GACGACGGGAAATCAAAACTCAAACTACACTTCCAGGACACTGACACCAAAGTTATCGAG
ACCAAGGAGTTGGAGTGTCAGATCCTTCAGAGCCTGTTGTTCTGTATGCACGCCTTCCTC
ACGGCCAAGGTGGCGTCCGTCGACCCGGCCTTCCTCGCCTCCATACAGCACGCCACTTAG
Protein sequence:
MIVLTNATGISWKIAGGVHLEDRLARYRHVEPLGPDAVAVVVVREERRHLVVDKKTFTVV
HMGRAAGLTLDWSSGFSLSEGTPGAPPVWSYRFSQLRGSSDDGKSKLKLHFQDTDTKVIE
TKELECQILQSLLFCMHAFLTAKVASVDPAFLASIQHAT