| New model in OGS2.0 | DPOGS207235 |
|---|---|
| Genomic Position | scaffold1146:+ 22398-24627 |
| See gene structure | |
| CDS Length | 1533 |
| Paired RNAseq reads | 25 |
| Single RNAseq reads | 84 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008592 (9e-172) |
| Best Drosophila hit | connectin (2e-42) |
| Best Human hit | SLIT and NTRK-like protein 2 precursor (2e-13) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (7e-83) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (2e-74) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL39248 |
Nucleotide sequence:
ATGGATACAAACATTCAATATTTACTTCTGGCTCTTGCACTGACCTCAGTGCAAATATCG
TTTACTGAGAGCCGTCTAAATGAAAAACGCAGGGATAAAACTGAAAGACGATATCATGCT
GTTCAAGCTAAAGACAACATGTGCGAAATTACTAACAGAGAATCCAAAGTACATTGCTAT
TGTGAAAATACTGAAGTTAAAACTGCCACTAGAGCAGACTGCTGGGTATTTAATGGCGGT
ATCGATGAAACCGACCCAATTTGGTCGAGCTTCAACTCCCAACCGCATCTGGAAAGATTA
ACATTCAATGTCAGGTCTGATGGTGCACTAAAATTTATTCCTCTTCAAGTTATCCATCGT
TTGAAAAAGTTGCAAAAGCTTTTCATACATTACGCGACCTTGAATAAAATTGGAAAAGAT
TCTTTTAGAAATATGTCAACGCTGAGAGAAATAACTTTAATGAATGATAAAATCATGGAG
CTAGATTTTTCCGCATTTTCAAGTCTCCCTGCACTCGTAAATCTGACAATAAAAGGAAAT
AAAGTAATCGAGATACAGCGGGATGTTTTCGTCGATTTGCCGAGTCTAAAATATCTCGAT
CTGTCGTTTAACAGCATTAGTCTGGCTCACGATGGATGTTTTGAACATTTGAATGTACTA
AACGATCTCGTACTTGAAGCGAATTTAATATCGGTATTAACTAAAGATACTTTCAAGGGT
TTGGCTAATTTAACGAGATTAGATTTGAGATCCAATAAAATGTCTATGGTTGGTGATCTA
ACGTTTTCAGAATTATGGAATCTGAATGAACTCCTGCTAGATAATAATGAATTAAAATAT
TTATCTGAAAGGGCTTTTGATGGACTAGCCATGCTTCAAAAACTATCAATGACAGGAAAT
AAATTGCAAACCATTAACGAAGGACTCTTGGAAGGCGTAAGAGGGTTAGAATTATTGGAT
TTAAGGAACAATGAGATTGAATTGTTCACTTACGAAACAATCAAACCTATTCTAGAAAAT
TTAAAAATGAAGACGTCAGTTCTCTATTTGAGTGGTAATGACTTCAAATGTGACTGTCGT
TTGTCGTGGATACAAGTTTTAAGAAATGAAACCAAAAGTGAACCACTTCGAACGGCTCTC
GACGAAATCACCTGTTCCTTTATGACTGTCAATAAAGCTTCACCAAAAACAAATTTAGAG
AACGGTGATGATAGGATGAAAAATCTTAATTCGTTCGAAACAGAACCGAATATTGGCATA
TTTCAACAAAATGATAATGGCGAAGATGATTCTAGTGACATAAGTTCACAATATAAATTT
GAAACCACAACAAAACTGTTTGCTAATGAAGTCGTTTTAGTTGATATACCTCCTGAAACA
TTATCTTGTCAAGGTGAACTGGTAGCAACAGGCGAAGATTCGCTAATGCTTTCATCGAAA
GATGATAGTTATTGGCACTCAAATACATGTATGAAAACCTTGTCAAGTTTTCTAATGATG
TTTACTTTAGTCATTATATGTACTATTCGTTGA
Protein sequence:
MDTNIQYLLLALALTSVQISFTESRLNEKRRDKTERRYHAVQAKDNMCEITNRESKVHCY
CENTEVKTATRADCWVFNGGIDETDPIWSSFNSQPHLERLTFNVRSDGALKFIPLQVIHR
LKKLQKLFIHYATLNKIGKDSFRNMSTLREITLMNDKIMELDFSAFSSLPALVNLTIKGN
KVIEIQRDVFVDLPSLKYLDLSFNSISLAHDGCFEHLNVLNDLVLEANLISVLTKDTFKG
LANLTRLDLRSNKMSMVGDLTFSELWNLNELLLDNNELKYLSERAFDGLAMLQKLSMTGN
KLQTINEGLLEGVRGLELLDLRNNEIELFTYETIKPILENLKMKTSVLYLSGNDFKCDCR
LSWIQVLRNETKSEPLRTALDEITCSFMTVNKASPKTNLENGDDRMKNLNSFETEPNIGI
FQQNDNGEDDSSDISSQYKFETTTKLFANEVVLVDIPPETLSCQGELVATGEDSLMLSSK
DDSYWHSNTCMKTLSSFLMMFTLVIICTIR