| New model in OGS2.0 | DPOGS213711 |
|---|---|
| Genomic Position | scaffold3244:+ 3656-4487 |
| See gene structure | |
| CDS Length | 273 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 263 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008433 (3e-38) |
| Best Drosophila hit | GDP-mannose 4,6-dehydratase (6e-28) |
| Best Human hit | GDP-mannose 4,6 dehydratase (6e-30) |
| Best NR hit (blastp) | GDP-mannose 4,6 dehydratase [Salmo salar] (2e-31) |
| Best NR hit (blastx) | GDP-mannose 4,6 dehydratase [Salmo salar] (2e-30) |
| GeneOntology terms | GO:0016829 lyase activity GO:0008446 GDP-mannose 4,6-dehydratase activity GO:0019673 GDP-mannose metabolic process GO:0050662 coenzyme binding GO:0044237 cellular metabolic process GO:0005622 intracellular GO:0003824 catalytic activity GO:0005488 binding GO:0008152 metabolic process GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
| InterPro families | IPR006368 GDP-mannose 4,6-dehydratase IPR016040 NAD(P)-binding domain IPR001509 NAD-dependent epimerase/dehydratase |
| Orthology group | ND |
Nucleotide sequence:
ATGGCAGAGCCTGGCACTAGTGGAAATGTTAATAGAAAAGTCGCATTAATCACCGGTATA
ACCGGACAGGATGGATCTTATTTAACTGAATTCTTAATTGAAAAAGGCTATGAGGTCCAT
GGAATTCTTCGGCGGTCATCCTCATTTAATACCGGTCGTATTCAACATTTGTATGGACAG
CCAGCCTGTCACACTGGCGGTAAAATGCATCTCCACTATGGAGACCTCACAGACACAACA
TGTCTTATAAGCATTATAACTAAGGTGAGTTAA
Protein sequence:
MAEPGTSGNVNRKVALITGITGQDGSYLTEFLIEKGYEVHGILRRSSSFNTGRIQHLYGQ
PACHTGGKMHLHYGDLTDTTCLISIITKVS