| New model in OGS2.0 | DPOGS200508 |
|---|---|
| Genomic Position | scaffold4542:- 251-3838 |
| See gene structure | |
| CDS Length | 1272 |
| Paired RNAseq reads | 275 |
| Single RNAseq reads | 687 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001736 (3e-31) |
| Best Drosophila hit | meiotic central spindle (2e-13) |
| Best Human hit | zinc finger protein 62 homolog isoform 1 (3e-15) |
| Best NR hit (blastp) | unnamed protein product [Tetraodon nigroviridis] (3e-16) |
| Best NR hit (blastx) | unnamed protein product [Tetraodon nigroviridis] (3e-21) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005622 intracellular GO:0045449 regulation of transcription GO:0046872 metal ion binding GO:0005634 nucleus GO:0003676 nucleic acid binding |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTGATTTGTTGGCGTGCCGTGTGTGCCTGGCGTCTGAAGACGTGAAGCTTTACAGT
CTCAATAAGTACAATTTGATGCAATCCTACGAGATGCTAACCGGAATACAGCTGACTTTA
GATAATATAAAACACATCCACCTAGCACACCGTCACCCGTACAGGAGAGACGAGGAACAT
AGGCGATTCAACGTAGACTACACGACGGTCAAAAAAGAGACCACCATTAAAGAAGAATTG
CCAGAGAAGAGGAAGAAGAGAAGAAAAAAGGAGAGTATAGAAGTTAAACTTGAAGATGAA
CCCCAAGACGATGGTTACGGCAATTACGAGAGCGATCAAGATATACCGGTCCTGGACTTG
GATATACGTGGATTGGAGCTGCCAGATGGTCAGGAGATAGCGGGAGATAGTCAAGAGATA
GCAGGGGATAGTCACGAGATAGCTGATAAAGATCTCAAGGATGTGGAGATAGTGCTGCTG
AGTAAGGCGGAGCAGATACAGGAGATTGAAAAGAGGAAGACATCTTCCAACTACGTGAAC
TCCTACTACAAGTGTGAAAAATGCTTCAAGGGGTTTATCACTGAGCCTACCTACAGAAAT
CATATGGTCTGCCACGATCCTGAGCGCGGTCCACACACTTGCGACGTTTGCAACTCCCAC
TGGCCGTGTGCGCGCGCCCTTAGAGCACACTCGCTGAACACACACGAGAGGAAATACATG
TGCAGGGTGTGCGATCATGTGTCGAGATCCAGCCATCGAGCCAAGGAGCACAGCAAGTGG
CACAGCGGGTTCTCCTTCATATGCAAGACGTGCGGCGCCTCGTTCGCTAAATCCACGAGT
TATCTGACACACATGCGGCTCCAGCATCCGTCGAGCAACTCGTGCGAGATCTGCGGCGAG
TCGTTCGTGGGGGAGTTCGGGCTGAGGATGCACAAGAAGAAGTCACACGTCGGTACCACA
CGGATGCAAGCGGTCAGTATACCCACTAACCAGCTGCTAACATCTGCTCAACACCAGTTC
CAGTATCCGGCTGTGAGTCAGTGCGAGCGCTGCCATCACAAGTTCGACTCCCGGGAGGCG
CTGCTGCGACACGTCCAGCTGTCCGGGGACGCGTGCGACGCGGGCGAGGACACGCCACGG
CCGTGTCCTCACTGTGGGGAGGGTTTCGACTCTGACGACAGTCTAAGGGACCACGTGGCG
TCCCATGAGAAGGACACCGGCGTCACGTGTGAAGAGGTTAGCGTTATACATTTTAGAGGT
GGTAGAGACTAG
Protein sequence:
MSDLLACRVCLASEDVKLYSLNKYNLMQSYEMLTGIQLTLDNIKHIHLAHRHPYRRDEEH
RRFNVDYTTVKKETTIKEELPEKRKKRRKKESIEVKLEDEPQDDGYGNYESDQDIPVLDL
DIRGLELPDGQEIAGDSQEIAGDSHEIADKDLKDVEIVLLSKAEQIQEIEKRKTSSNYVN
SYYKCEKCFKGFITEPTYRNHMVCHDPERGPHTCDVCNSHWPCARALRAHSLNTHERKYM
CRVCDHVSRSSHRAKEHSKWHSGFSFICKTCGASFAKSTSYLTHMRLQHPSSNSCEICGE
SFVGEFGLRMHKKKSHVGTTRMQAVSIPTNQLLTSAQHQFQYPAVSQCERCHHKFDSREA
LLRHVQLSGDACDAGEDTPRPCPHCGEGFDSDDSLRDHVASHEKDTGVTCEEVSVIHFRG
GRD