| New model in OGS2.0 | DPOGS202059 |
|---|---|
| Genomic Position | scaffold356:- 94433-101842 |
| See gene structure | |
| CDS Length | 834 |
| Paired RNAseq reads | 98 |
| Single RNAseq reads | 312 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012535 (2e-123) |
| Best Drosophila hit | hedgehog, isoform B (2e-63) |
| Best Human hit | indian hedgehog protein precursor (3e-65) |
| Best NR hit (blastp) | hypothetical protein, conserved [Pediculus humanus corporis] (2e-76) |
| Best NR hit (blastx) | hypothetical protein, conserved [Pediculus humanus corporis] (1e-74) |
| GeneOntology terms | GO:0048557 embryonic digestive tract morphogenesis GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter GO:0003406 retinal pigment epithelium development GO:0060220 camera-type eye photoreceptor cell fate commitment GO:0048596 embryonic camera-type eye morphogenesis GO:0002053 positive regulation of mesenchymal cell proliferation GO:0003382 epithelial cell morphogenesis GO:0090136 epithelial cell-cell adhesion GO:0032332 positive regulation of chondrocyte differentiation GO:0048666 neuron development GO:0048745 smooth muscle tissue development GO:0016787 hydrolase activity GO:0016020 membrane GO:0005576 extracellular region GO:0005886 plasma membrane GO:0008233 peptidase activity GO:0007275 multicellular organismal development GO:0016539 intein-mediated protein splicing GO:0007154 cell communication GO:0007267 cell-cell signaling GO:0006508 proteolysis GO:0001763 morphogenesis of a branching structure GO:0031016 pancreas development GO:0035264 multicellular organism growth GO:0031012 extracellular matrix GO:0048314 embryo sac morphogenesis GO:0030704 vitelline membrane formation GO:0009790 embryo development GO:0001944 vasculature development GO:0043010 camera-type eye development GO:0001708 cell fate specification GO:0048074 negative regulation of eye pigmentation GO:0009880 embryonic pattern specification GO:0005615 extracellular space GO:0005515 protein binding GO:0009968 negative regulation of signal transduction GO:0043066 negative regulation of apoptosis GO:0045595 regulation of cell differentiation GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0030154 cell differentiation GO:0001649 osteoblast differentiation GO:0050679 positive regulation of epithelial cell proliferation GO:0008284 positive regulation of cell proliferation GO:0001569 patterning of blood vessels GO:0001501 skeletal system development GO:0045596 negative regulation of cell differentiation GO:0007389 pattern specification process GO:0048469 cell maturation |
| InterPro families | IPR006141 Intein splice site IPR001657 Peptidase C46, hedgehog protein IPR009045 Hedgehog/DD-peptidase, zinc-binding motif IPR001767 Peptidase C46, hedgehog protein, hint region IPR000320 Hedgehog, N-terminal signaling domain IPR003587 Hedgehog/intein hint, N-terminal IPR003586 Hedgehog/intein hint domain, C-terminal |
| Orthology group | MCL10604 |
Nucleotide sequence:
ATGAATCAATGGCCAGGGGTTAGGCTGAGGGTGATCGAGGGTTGGGAGGAAGAAAACTCC
CACCTGGAGAACTCCCTCCACTATGAGGGCCGGGCCGTTGACCTCACCACCAGCGATCGC
GACCGCAGCAAGTACGGCATGCTGGCTAGACTAGCTGTTGAAGCCGGCTTCGACTGGGTC
TTCTACGAAAGCCGCTCCTACATCCATTGTTCTGTTAAGACAGAATCTTCCGTAGGAACA
GGAGCAGGCTGCTTTCCTTCTGGTTCTTTGGTCCATACAGAAAAAGGACCTAAAAACATC
GACTCTCTTCAAAAGGGTGATCGAGTTTTAGCGGCCGATAGTGATGGAAAGTTAGTGTAT
AGTGAGGTTTTGACTTTCATTGATCGAGATCCGAACGCTGTACGTCAATACATCGAATTG
ACGGCCGAAAATAATGCTACTATTACGACGACGCCATCCCACCTCTTGCTGCTAGCCGCT
GCTGATGGTTGGCGGGAATCATTTGCTGATAATGTAGAGATTGGCGATTTCCTTCTAACA
AGAGGACAGGGAAGCGTGATGCGACCTTCAAGAGTTGTTAACATTAGAAGGGTTTCTAAA
CTTGGGGTATTTGCACCTCTAACGAGAACTGGAACTATCATTGTGGACGATGCCTTAGCG
TCCTGCTATGCTCTCATCAATAGTCATTCCATTGCCCACGCTGCCATGGCACCCTTGAGG
TGGTTGGCCCAATGGAACAGAACACCTGAAGTTAAACGCGGTGTCCATTGGTATGCTAAC
GCTCTATATAATATCGGCGATTTCGTGCTACCCTCATCGTACAAGTATCGCTAA
Protein sequence:
MNQWPGVRLRVIEGWEEENSHLENSLHYEGRAVDLTTSDRDRSKYGMLARLAVEAGFDWV
FYESRSYIHCSVKTESSVGTGAGCFPSGSLVHTEKGPKNIDSLQKGDRVLAADSDGKLVY
SEVLTFIDRDPNAVRQYIELTAENNATITTTPSHLLLLAAADGWRESFADNVEIGDFLLT
RGQGSVMRPSRVVNIRRVSKLGVFAPLTRTGTIIVDDALASCYALINSHSIAHAAMAPLR
WLAQWNRTPEVKRGVHWYANALYNIGDFVLPSSYKYR