| New model in OGS2.0 | DPOGS202061 |
|---|---|
| Genomic Position | scaffold356:- 51628-59445 |
| See gene structure | |
| CDS Length | 1485 |
| Paired RNAseq reads | 780 |
| Single RNAseq reads | 2507 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012536 (2e-23) |
| Best Drosophila hit | CG11866 (1e-94) |
| Best Human hit | F-box only protein 28 isoform a (8e-31) |
| Best NR hit (blastp) | PREDICTED: similar to CG11866 CG11866-PA [Tribolium castaneum] (2e-126) |
| Best NR hit (blastx) | F-box only protein, putative [Pediculus humanus corporis] (2e-112) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR001810 F-box domain, cyclin-like IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL16437 |
Nucleotide sequence:
ATGGTGTCGACGAGGCAGATGAGTAGTATAGGTGGTGGTAGTGGCAGTGGTGATGGTGCT
GGGCCGTCTCACGCGGAGGCCGTGACGGTGGCGCGCGTAACACGCCACTCCAGTGCCTTA
CTCCCCGGGGGCTCTTCACCGCACGCCGGCAGGAACATCATACAAGCACCCAAGAGCTTT
AACACCAATATGTTGGATATGCCCATAGAAGTTTTAGAAAAAATATTCCGCTATTTAGGA
TTCAAAAGTGTCTCCCACTTGAGAATGGTTAACCGACAATTTAATACAATATGCAGTAGT
ATGCTCAATTCAACATTTCAAAAGCTCCAAAACCAGATGCTTAATCGTTTCCAAGCAATA
AAAGCTAAGATGCCTCGTCGTGAATCAGCCAGGCGAAGCCACCCTCTTGCCTGTGAATCC
GATATCATTGAAACTCTTCATATGAGATTGAGTCTGTTACAAATGACCTTTGGTAAACAC
ATTGAGAGGAAACATTGTTGTTTTTTTCCTGGAGAGATACTGGATGAGGTTTATAGTATT
TTGTCTTATTTAAAAACAACAACCAAGTTAGCGAGGCCTTACAAAGTGACGGATGAGCTC
TTTGATCTAACGACGATGGCAATGGAGTACTTCAAGGAACACATTGAACCAAATTTACCA
GAGATCACATATTTTGGTACAGACTTTTTTGATATCACCACAGCATTTTCACCTGGAGAG
TCGAGTAAGTCCTACATGTGTTTGGACTCGCCTCCGCCCAGCGGTTTCGAGTCCCAACAG
GCGAATAACACATCAGAGCGTCACGTCTCCTCGCTGAACCTGTACATGGAGGAGAGCCTG
CCGCCCTCACCTCCACCGCCGCAGAGCAATATGGTTTTGAGAAAAAGGATACATAGGATC
AAACAGGGGATGAAGAAGTACAACGATCAACTGTCGGCATTACGGAGCGATCTGAGGAGT
TGTAAACGTAAAACTGCGTTACAACAGAAACAGATCGCGGAACAACAGAAACAGATCGCT
GAACAACAGAAACAAACACTGGAATACGCGAACCGTCTGGATGACTATGATAAGAAGAAT
GAGGAGACCAGTAGAAAATTTCAAACTTTATTACAGGAGTTGAACAAATGTAAAACGGAA
CTGCAGTATTGGCGTTCGCGTTCACCGGCCGTGCCTCCTTTATGTGCGGAGTGCGGGGCT
TCGTTGAGACTATCACCAGCGCCTTCGTTACAGTGGGCAGCCGGTTCAAGTACGGAGACA
AACGAGATTGAAACGGCTAGTGGGAGTAAAATTGTCGAGACGCCAGTCGAGGTCAAAGAC
AAGGACGGCAAGGACAGCAACAGCAAGGACAGCAACGTCAAAGACAGTAATAGCAAGGAT
AGCAACGAGGATACGAGCACGCCGCCGTCACGCCGCAGAGCCTCCGCTGACGCCACCACG
CCCGATAGAAAGAAGAGGCGACTCACACGACCAAGAAAACTATAA
Protein sequence:
MVSTRQMSSIGGGSGSGDGAGPSHAEAVTVARVTRHSSALLPGGSSPHAGRNIIQAPKSF
NTNMLDMPIEVLEKIFRYLGFKSVSHLRMVNRQFNTICSSMLNSTFQKLQNQMLNRFQAI
KAKMPRRESARRSHPLACESDIIETLHMRLSLLQMTFGKHIERKHCCFFPGEILDEVYSI
LSYLKTTTKLARPYKVTDELFDLTTMAMEYFKEHIEPNLPEITYFGTDFFDITTAFSPGE
SSKSYMCLDSPPPSGFESQQANNTSERHVSSLNLYMEESLPPSPPPPQSNMVLRKRIHRI
KQGMKKYNDQLSALRSDLRSCKRKTALQQKQIAEQQKQIAEQQKQTLEYANRLDDYDKKN
EETSRKFQTLLQELNKCKTELQYWRSRSPAVPPLCAECGASLRLSPAPSLQWAAGSSTET
NEIETASGSKIVETPVEVKDKDGKDSNSKDSNVKDSNSKDSNEDTSTPPSRRRASADATT
PDRKKRRLTRPRKL