| New model in OGS2.0 | DPOGS215167 |
|---|---|
| Genomic Position | scaffold179:- 35097-44168 |
| See gene structure | |
| CDS Length | 3996 |
| Paired RNAseq reads | 2178 |
| Single RNAseq reads | 5059 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012171 (9e-46) |
| Best Drosophila hit | short stop, isoform O (9e-52) |
| Best Human hit | utrophin (1e-62) |
| Best NR hit (blastp) | PREDICTED: similar to utrophin [Apis mellifera] (5e-97) |
| Best NR hit (blastx) | PREDICTED: similar to utrophin [Apis mellifera] (1e-84) |
| GeneOntology terms | GO:0005515 protein binding GO:0043034 costamere GO:0045202 synapse GO:0005737 cytoplasm GO:0002162 dystroglycan binding GO:0016010 dystrophin-associated glycoprotein complex GO:0046716 muscle cell homeostasis GO:0008270 zinc ion binding GO:0005856 cytoskeleton GO:0045213 neurotransmitter receptor metabolic process GO:0009986 cell surface GO:0003779 actin binding GO:0005626 insoluble fraction GO:0007517 muscle organ development GO:0030018 Z disc GO:0030055 cell-substrate junction GO:0043043 peptide biosynthetic process GO:0045449 regulation of transcription GO:0050998 nitric-oxide synthase binding GO:0005792 microsome GO:0007519 skeletal muscle tissue development GO:0021629 olfactory nerve structural organization GO:0045121 membrane raft GO:0042383 sarcolemma GO:0005509 calcium ion binding |
| InterPro families | IPR001715 Calponin homology domain IPR001589 Actinin-type, actin-binding, conserved site |
| Orthology group | MCL10308 |
Nucleotide sequence:
ATGGGACACGCCCGACCACCGTCTGAATTGTGTCTAGAAAGCAACTCCGTCAGCCGGGCT
GAAGCGTGGACACGTTGGAAGAAACAATTCCAGTTGTTCCTAAAGGCATCGGGGGTAGAT
AAAGAGGAAGCTGGAGTGCACGCTAGCTTGCTTATAAACTTGATCGGAACGGAAGGTTTC
ACGTATGCGAGACCTTCACTTTTTCAAACGACGCCGAGAAAGACGGTCGTTTTGAAAAAT
ATTTACGAGTACTACGGAGTGAAATCGAAGGTAACGTTGGAGAGATACACGTTCAATACG
AGAAACCAACAGCAGTCGCGTCGTTGCATAGGCGCCCGGTGGGGAGGCAGCATCGGCACC
GGCGCGTGTCGACAATGTCGGCGTGTGAGGAGGCGCTCGCGGTTCGAGCTGACGTGCCGG
GGCCACTCGAGATACCGCCAGCACCTACAGCCGTACCTTGCTTCCCAGGGCCGCCAGCCC
GCTGCGACCGGACCCGCTCTCGTCCCCTACACCTCCTCTCCTAGTAGCCGTGGCCACTGT
GCTCACGGTGTCGACTATCCCGTCATTTCGGTGCAATGTTATGTGGTTCAAAATTCTAGT
AATTTCGCTAGGGTGTGTAAAGTGAATAGACCCGTTAAAAAGTTAAATGGTATAGGAGTT
CATGAGGAAAACAATAATAACATCACAGACGACGAGAGTGACTATGAGCGGGAAGACGTG
CAAAAGAAAACGTTCGCAAAATGGATAAATTCGCAGCTGGCAAAGCAAGGCAAGCCGCTC
GTCAACGATCTGTTCCAAGATCTGCGCGATGGAGAGGTGCTGCTCTCATTGCTGGAGATA
CTCACCGCACAACAGTTCAAGCGTGAGCGCGGCCGCATGCGGGTTCATCACCTGAACAAT
GTGAACGCGGCCCTGCGAGCACTGGCCGCCGCCGGCGTCCGGCTCGTCAACATTAGCAGC
GGAGACATCGTTGATGGCAACCCCAAACTCATACTGGGACTCGTTTGGAGTATTATACTG
CACTGGCAGGTTCATTACCACCTCAAGGAGCTCATGTCGGAACTTCAACAGACGAACCTG
GAAAAGACTCTTCTAGCCTGGTGTCGTAATCACACACAGGATTACGCGGGTGTGAAGGTT
GAGAATTTCACGTCATCGTGGTCGGACGGGCTTGCGTTCAGCGCACTCCTGCATCGCTTC
CGTCCGGAGTTGTTCCGATACAACGACGCATTAGGACTCTCTCCTTCAGAGAGACTCGAT
CGAGTCTTCACACTGGCGCAAGACCATCTCGGGATCGATCGACTTCTGGACCCCGAAGAC
GTCAACACGACTAACCCTGACAAGAAGTCCATAATGATGTACGTGATGTGTCTGTTCCAA
TCCCTTCCTCAAACGCCGGCTTCACACGAGTCCTGCGACCTGGAGCATGGCGACGGAGAC
GAGATAGGAAGCCCCGGGGACCTCGGAGCGGAGAAGTTTCTTCTGGAGCTGTCGGAGCAG
CAGTGGCGTGTTGGCGGTGTTCTGGAGGAGGGGGCTCGTCTGCTGCGGGAGGCCGCGTTG
GCCCGAGACGAGGCGGCTGAGGTGCGGCTTCAGCTGCGACTGCTGGCGCGGCGATGGGAG
GCGCTCCGCGGCGCCGCTATGACGCGCCAAGCTGACCTGCACCGTGCTCTCATGCGAACA
CAACATGACCACCTTCAGCGCTTTCGGCGCTGGCTCACCGCAACTGAGGACCGCATGTCT
CGTATGGAGGCCGTCTCCGCGCCGGCCGGTGCCGCTTTAGAAGCGACGCGAGCGCTGCAC
GCCGACCTGCGACAGCAGCAGCCGCTCGTCGACGCTCTGGCGGACTGCGTGTTGGTCGTC
GACGACGAGGACGATCGTCATGAACACCAAGACGGCTCGGACCGTCCGGACCTACCTCTC
ACCAGCAGCGATAACGTGGCGGCCATGGAGGACGAGTTGCGGGCTCTAGGAGAGCGCTGG
TCACATGCGTGTCAATGGACGCTTTCCCGTCTGCAGCGGCTGCAGCGTTACGTCGACCTG
GAGCACCGGGCCGACCTCCTTCGAGACAAAGTTTCAACCCTAGAAAACGATCTTAAACAG
ATGGAAGCCTACCCCGCACAGGAGATTGGCGAGGTTCTAGAGCGAATACGGTCTCTCCAG
CGTTGCGGCGCGGAGCTGCGAGTGAGACGCGACGAGCTCAATGAACTCCTGCGGTCCCTA
GAGGAACAAGACGACGACCACACGGCGAGTCAGCTGGCAGACCGCGCGGACCAGTGCCAG
GACAGGCTGGACGCGCTCGACCTCATCCTGCGCGTGCAGGCAGATAGGATACGAGAGCTC
GGTTTTGACGTGGACGTGTCGAGTGAGTTAGGCGGAGAGGTGGGTGGGGCTGGCGGGACC
GACGAGCACGTCAGCAAGAAGCCGCGGCTGGAGGCCGAGCGTGCGGGCGTAGACTTCCAA
GCTGGTTACCGCGCGTTTAACAACTGGGCAGCTGAAACTGAAAATGCCTTGCTGATGTGT
ATGGAACAGCTCCAAACGGCAAGCGGAACGGAAAAGGCGACAGGAGAGGCGCGCACCTTG
CTACAGCGAGTCACGAGGGAGAGCGAAGAACGACGAGCGGACTTCAGCAACGTGGAAGAA
ATACAGAGGCGACTGGCCGCCGACCAGGAACTTGCCGAGGAAGCCAAATTACACGCACAA
AGCATAGAAGAGGTCAAGAAGCGATGGGAGGGAATACAAAAAATGCTCCTCGACATACGG
AACACCTTGAACCTTTTGGAAGATAAGGACAATGTTTATAAAAATATTAAAGCTTTCGAA
TCCGATCTTCAGGACATACACGCGTGGAAAGACAGAATGCTCAAGGAGACGGCGACCAAC
AACCAATTGATACATTTACGAAATAAGATACGAACACTCAAACAGCTCGAAATAAAACTC
AAAGAGTTAAACGCGCAATCGATCATTTTGCTGACGAAAGCTTTTTCAAAGACACACAAG
GACGAGGTGGAGGCGGACACGAAACGAATCAACGAAGCCTTCGAAGAATTGTTCCTGCAT
CTGTGCAAGAAGGAAGTGGAAATAAAAATCGCACTGAACAAAAAGCTTTCCCCGATACAA
ACCGAAGACGAGTACAAGGCGGTGCAGAGGAAGATACAAGAGATGGAGTCTCAGATAATA
TCAGAACACGCGATCATCTCCACCAGGGAGGAGATGGCCAAGAAACTAGAGGAGTTGAAA
AATATGAGGCGACAGTTCGACGATCTGCAGGCCTCGTACGACGCGGTCGTGAAGGAGAAA
CGAGACAAGTTCGAAAAGGGCAGTCTCGAAGAGTTGAATCTGAGGAGCAGTGTCGAGAAC
TTGGTGCTGAGGTTCGACGACTCCAAGACCATTTTGGAGCAAAAGATTGACAAGTTAGAG
AAAGGCATCTCTTTGCTGGAACGTCTCGAGGGCGAACAGAACGCCGTCGACTCGTGGCTG
AAGGGCCTGCATCGCTTCATGGACGAACATAGAGACGTGCCGGTAGGAGAGCTGCAGCTG
CTGGAGGAGTTGCTGGACCGCAGCAACAAGTTCCTTGAAGAAAAATCTGAATATACGGCC
AGAGTGGAGGCCATCGAAGAAATGAAGCGGACCGTGCTCGAAGATTGCGAAGAGGTTGTA
GCGAAGACTCTGAAGGCCGACACGCTGAGAAAACGATTCGATTCGCTGACCGAGGAGTCC
TTGAAGACGAATGAAGAGCTGCGGCGAGCGCTCGAGAAGACGGAGGGTCTCTTCCGACGG
GTCGACGACCTGGAGACGTGGCTGGGACGGCTCCGAGACGACATGCCGCGGGAGGACGAG
TGCGGCATCGAGGACTCCGCGCAACTGTATCAGATGAAAATGCGCTTCCAGACGCTCAAG
GAACGCTGCGATGACAAGACGGACGAGTTCCGCAACCTCAACGAGGACGGTCGGTGGCCC
TCACACGGTACGGTTGCCGTGAGACTTGGATCTTAA
Protein sequence:
MGHARPPSELCLESNSVSRAEAWTRWKKQFQLFLKASGVDKEEAGVHASLLINLIGTEGF
TYARPSLFQTTPRKTVVLKNIYEYYGVKSKVTLERYTFNTRNQQQSRRCIGARWGGSIGT
GACRQCRRVRRRSRFELTCRGHSRYRQHLQPYLASQGRQPAATGPALVPYTSSPSSRGHC
AHGVDYPVISVQCYVVQNSSNFARVCKVNRPVKKLNGIGVHEENNNNITDDESDYEREDV
QKKTFAKWINSQLAKQGKPLVNDLFQDLRDGEVLLSLLEILTAQQFKRERGRMRVHHLNN
VNAALRALAAAGVRLVNISSGDIVDGNPKLILGLVWSIILHWQVHYHLKELMSELQQTNL
EKTLLAWCRNHTQDYAGVKVENFTSSWSDGLAFSALLHRFRPELFRYNDALGLSPSERLD
RVFTLAQDHLGIDRLLDPEDVNTTNPDKKSIMMYVMCLFQSLPQTPASHESCDLEHGDGD
EIGSPGDLGAEKFLLELSEQQWRVGGVLEEGARLLREAALARDEAAEVRLQLRLLARRWE
ALRGAAMTRQADLHRALMRTQHDHLQRFRRWLTATEDRMSRMEAVSAPAGAALEATRALH
ADLRQQQPLVDALADCVLVVDDEDDRHEHQDGSDRPDLPLTSSDNVAAMEDELRALGERW
SHACQWTLSRLQRLQRYVDLEHRADLLRDKVSTLENDLKQMEAYPAQEIGEVLERIRSLQ
RCGAELRVRRDELNELLRSLEEQDDDHTASQLADRADQCQDRLDALDLILRVQADRIREL
GFDVDVSSELGGEVGGAGGTDEHVSKKPRLEAERAGVDFQAGYRAFNNWAAETENALLMC
MEQLQTASGTEKATGEARTLLQRVTRESEERRADFSNVEEIQRRLAADQELAEEAKLHAQ
SIEEVKKRWEGIQKMLLDIRNTLNLLEDKDNVYKNIKAFESDLQDIHAWKDRMLKETATN
NQLIHLRNKIRTLKQLEIKLKELNAQSIILLTKAFSKTHKDEVEADTKRINEAFEELFLH
LCKKEVEIKIALNKKLSPIQTEDEYKAVQRKIQEMESQIISEHAIISTREEMAKKLEELK
NMRRQFDDLQASYDAVVKEKRDKFEKGSLEELNLRSSVENLVLRFDDSKTILEQKIDKLE
KGISLLERLEGEQNAVDSWLKGLHRFMDEHRDVPVGELQLLEELLDRSNKFLEEKSEYTA
RVEAIEEMKRTVLEDCEEVVAKTLKADTLRKRFDSLTEESLKTNEELRRALEKTEGLFRR
VDDLETWLGRLRDDMPREDECGIEDSAQLYQMKMRFQTLKERCDDKTDEFRNLNEDGRWP
SHGTVAVRLGS