New model in OGS2.0 | DPOGS215167  |
---|---|
Genomic Position | scaffold179:- 25122-35072 |
See gene structure | |
CDS Length | 3624 |
Paired RNAseq reads   | 1670 |
Single RNAseq reads   | 4966 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008637 (4e-18) |
Best Drosophila hit   | dystrophin, isoform F (1e-28) |
Best Human hit | utrophin (7e-14) |
Best NR hit (blastp)   | dystrophin, putative [Pediculus humanus corporis] (9e-51) |
Best NR hit (blastx)   | dystrophin, isoform H [Drosophila melanogaster] (8e-30) |
GeneOntology terms    | GO:0008586 imaginal disc-derived wing vein morphogenesis GO:0005856 cytoskeleton GO:0005198 structural molecule activity GO:0008307 structural constituent of muscle GO:0016010 dystrophin-associated glycoprotein complex GO:0008092 cytoskeletal protein binding GO:0003779 actin binding GO:0005509 calcium ion binding GO:0008270 zinc ion binding GO:0007517 muscle organ development GO:0005200 structural constituent of cytoskeleton GO:0007274 neuromuscular synaptic transmission GO:0048172 regulation of short-term neuronal synaptic plasticity GO:0030010 establishment of cell polarity GO:0046716 muscle cell homeostasis GO:0050699 WW domain binding GO:0007474 imaginal disc-derived wing vein specification |
InterPro families   | IPR018159 Spectrin/alpha-actinin |
Orthology group | MCL40304 |
Nucleotide sequence:
ATGCTGCTGAACGCGGGCGCGCCGGCCGTGGCGAGACGACTTACGCAGCTCAACGCACGC
TGGACGGCCGACACTCACGCCGTCTACGAAAGATATAAAGTGCTGGCGGAGGCTTGGCTG
GAGGCTGGGGAGCTGCGGGCCTGGCTGTCCGCACAGGCCGCCTGGCTGGACGGACTGCAG
CGGCGACTGAGACCAGATACGTCGCGAGCCGCGCGCGCCGACGCAGAGGACATCTCCGAT
GAACTATACGATCTCGAGAACTACATCGCGAACCGCGACGAGGCACGGGTGAGTCGCATA
GAGGCCGTCGCCAGACAACTAGCAGATGCCCACATCATGCCGCAGTGGATACGGAACGAG
ACCGAGACCCTAGCCAGGCGCTGGGACGAGCTGCGGCTACAGGCCGCCGAGCGATCGGCC
GAGCTGGAGGCAGCGGCGCGGGAGGCGGCACGATGTGAGGTGGCTCTGGACTCGCTGCGG
CAGTGGCTGGGAACTGTCAGAGACGGGGGACACGTACCGACCTCCGCGGAGTTTGCGGAC
CGACGCGCGTCGCTGAGGGAGGTGCGAACTCAAGAAGAGGCTCATCGGGCGGCTGGACGA
CGGGAGGCCGCCGACCGACTAAGAGACCAGCTGGAGTTGGCCGAGCGCGAGCTGGTGTCT
CTAGAGCGCCGCGTGTCCGTGTCGGGAGCGGGGCCGGCAGCGGCAGCAGGCCGACTGCCC
GGAGACCTAGCAGCGCGTCTCCGTCGGGCCACGGAGACCCTGGAGGACGTGCAGCGAGCG
TCAGGAGGTCTGGCGCTCCACACACACGACCCGGATGAGGTTCGCACTCAGCTTCGAGCC
TGCCTGAGGTTCTACCGCACCCTGAGCGAGATCAAGTCGGAGGTGGAGTCGATCATTAAG
ACGGGACGGAAGACTGTGGAGGAGGGCGGAGCGGAAAGACAACGGGCGCTCTCCGCGGAG
ATCGACGCGCTCAAGGAACTCTACAATAGACTGGGGGCGCATGTGACGGAGGCCAAGGGT
CGCCTGGAGGCCGCGCTGCTCGCCGCCAGGGAGATACAGAGCGATCTCGCCTCTCTCGGC
GTCTGGCTGAGGAGCGCCAAGGTCGCGGGCCGACACAAGCTCGAGTTGGAGATGTCGCGC
ATGGCCGCCATACGAGACAAGCTACAAGCCAACTACGAGGAGCTGGCCCGGGGCTGCGAT
CCCGCGCATCTCGCCGGACTGCGTGCGCAACTAGACGACGTCAACGAACAGTGGGAGCGG
TTGAGACGCCGCGCTGACACCGGGGCCGACCCTGCGGAAGACCGAGGGGAAGACCCCGCC
CGGGGGGAGGACTCGGTCAGTATACACAGCCGCACCTGTTGTCGAAGACGGCGCGGTCGA
CCATTCCATCTATTTCCGGTTGTTGTTGAATTCCTTTCATTGTGTTTCATTTTTCCGCTT
TGTTTCGTGACCACTGTTTATAGTCGAGCACGTAGTCGCTTCCCACCGGTGGACTGTGTT
TGTCGTGCGAGGCACTGGTCGTGTGCGGCCGCCTCGGCTACCGAGGCAGACGGTAACGTT
CTTGTAGAGTACGAAAACGTAACCGACACTATCAAAAGACGCCTCGAGAGTCCCGTCAAT
TCACACGAAACAGAAAAACCCGAGCAAAAGAGGTCCAGGATACCGCTAGCTTTGAAGAGC
CCCTCGCCCATCAAGAAGGAGGTTCAGGAGGGCGGCGCGAGGAGCAGGGGTTCCTCGATG
GAGAGACGAGTAAGGAGTCCGAGCGGCAACAGGACGGACAGCACCAGCACCATGTCCGCT
GACTCCATCGAGGACACCACGTCACTGGCCGGCACCCCTCCTGCCGGCTCCGCCCCCGCC
ACGCCCAGTGCTATCAGGAAAGACAGCAGCACATTCAATCTTCTCAAGGACAGCGATTTA
TTCACACAAATATCTAAAAACAAAATCGTCGCAAAGAGTCCGTCGTCGTCGGAGGTGATG
GAGTCGCAATCCTGCCACGTGGTAGAGGTGAAAGAGCATGAGATCGTGAAGTCGACCGTC
GGCCTCACTTGGCCTGCGGAGGCGACGACCAGGGATGTGTTGGAGGACGTGGAGACCGTG
GAGACCGTGGTGGAGTTCATTCCGCAGACTGTGGACACTGTGGAGATCATAGAGGACACC
GAGGAGGACGAGGAGGAGGGGGCGGAGGAAAGGGACTCCGCCGGGCACTTCGGACACGAG
CCCAGGACGTTCGTGGTGGAGGTGAAGACACTTGAACACAGAATGAGGCCAACCATCGGG
ATATTGAAGAGGAGAAGAGACCACAGAGAGAAGGGGGTCAAGGTGGTGAGGATGGACGAG
GACGGCCCGTACGCGATCCCGGGGGAGGAGAGGGAAGTGATGTTGGCCACCACAGGAGAG
GGGCTGGACCCAGGAGGTCAAAACGGTCTCATGGACGATGAGGTTAACGAGTATCACATA
CTGGACGACCGCCTGAAAGAGATTGTGGACGAAGAGGAGAGAGACGAGGGGGAGGCAACT
AGCGAGGGTATATATACTGAAGTGGAGGAAGGACAGACGCGTGTGAGGGAGCCGCTGTCT
TCCTCGACTCCTGTGAAGAAACACGAAGACAACAGGGCGCACGTGGTCGGGGCCGATCAC
AAGGGTCATAAGGTGGAGGAACACGAGCAGATTCTGAAGAACCAAGTCGGCGGCGTGGCC
CCGGACGCGGCGGCGCTCATCTCCCGCGGGGACAGCCTCGTGTACCGTCTGCATGGGACT
CGGCCCGCGCTCGCTCGCCGACTGCAGGAGGTCGTGCAGGACCCGTTGCGGGCGAGGTGG
AGCGCGCTCAGGGCGGAGGCCGAGCACCGGCGGCGAGAGGCGCTGCGGGCCGAGGACGAC
TTGCGCGAGCTCGGGGCGAGGCTGGAGGCCGTGAGGCGGGCCGGCGGGGGCTCGGCCGCC
GCACACGACGCGAATCGACTGCGGGACCTGTGTCGAGATCTGCGAGACCGGCGGATCGCC
TTCCCGGAGCGAGCCGTCGCGGACGCCCTGGCCGAATACGACGCCGCCCGAGAACAGCGG
CGAGGCTCCGACGATCACCGACACAACCTAGAGGAGCGCTCGGAGGTGGTGACGCGGTGC
AACCTGGAGCGCGAGGCTGTGTCCAGAGCCTTGGGGTCACTGCGGGGGTCTCCGCTCGGG
GGAGGAGACTATGACGACTTCCCGCTACAAGAAGACGCTCTGAACGCTCGGGAGGAGGAG
GTGGCGCGCGCCCTGACCACCGCCCGCGGGGACGAGAGACTGGAACTGGAACAGGCGCGG
GCGAGTCTGTCGGCTCACGGACAGTATGTGTCCCATAAGCTGGCCTCTCTCAGGAAGTAC
AGCATCAGGCTGGACGACGCGCTCGCCTGGACTCAGACCATCCGGGACAGGATCACTAGG
GGGGACCTCTCCGGCCTCAGGGAGGCGGTGAGGGACAAGGAGGTGGAGATAGGGGAGGTG
CTGGAGAACTACAACAACATAGAGAGGGAGTGTCACGCGGCCAAACATAGCGTGTGCCAG
GAGATAAGAGACAGGGTGCAGAGACTCAGGGAGGATTGGCGGGAGATCAGGCAGGACGAG
GCTGGCGGAGAGATTGGTGAGTAA
Protein sequence:
MLLNAGAPAVARRLTQLNARWTADTHAVYERYKVLAEAWLEAGELRAWLSAQAAWLDGLQ
RRLRPDTSRAARADAEDISDELYDLENYIANRDEARVSRIEAVARQLADAHIMPQWIRNE
TETLARRWDELRLQAAERSAELEAAAREAARCEVALDSLRQWLGTVRDGGHVPTSAEFAD
RRASLREVRTQEEAHRAAGRREAADRLRDQLELAERELVSLERRVSVSGAGPAAAAGRLP
GDLAARLRRATETLEDVQRASGGLALHTHDPDEVRTQLRACLRFYRTLSEIKSEVESIIK
TGRKTVEEGGAERQRALSAEIDALKELYNRLGAHVTEAKGRLEAALLAAREIQSDLASLG
VWLRSAKVAGRHKLELEMSRMAAIRDKLQANYEELARGCDPAHLAGLRAQLDDVNEQWER
LRRRADTGADPAEDRGEDPARGEDSVSIHSRTCCRRRRGRPFHLFPVVVEFLSLCFIFPL
CFVTTVYSRARSRFPPVDCVCRARHWSCAAASATEADGNVLVEYENVTDTIKRRLESPVN
SHETEKPEQKRSRIPLALKSPSPIKKEVQEGGARSRGSSMERRVRSPSGNRTDSTSTMSA
DSIEDTTSLAGTPPAGSAPATPSAIRKDSSTFNLLKDSDLFTQISKNKIVAKSPSSSEVM
ESQSCHVVEVKEHEIVKSTVGLTWPAEATTRDVLEDVETVETVVEFIPQTVDTVEIIEDT
EEDEEEGAEERDSAGHFGHEPRTFVVEVKTLEHRMRPTIGILKRRRDHREKGVKVVRMDE
DGPYAIPGEEREVMLATTGEGLDPGGQNGLMDDEVNEYHILDDRLKEIVDEEERDEGEAT
SEGIYTEVEEGQTRVREPLSSSTPVKKHEDNRAHVVGADHKGHKVEEHEQILKNQVGGVA
PDAAALISRGDSLVYRLHGTRPALARRLQEVVQDPLRARWSALRAEAEHRRREALRAEDD
LRELGARLEAVRRAGGGSAAAHDANRLRDLCRDLRDRRIAFPERAVADALAEYDAAREQR
RGSDDHRHNLEERSEVVTRCNLEREAVSRALGSLRGSPLGGGDYDDFPLQEDALNAREEE
VARALTTARGDERLELEQARASLSAHGQYVSHKLASLRKYSIRLDDALAWTQTIRDRITR
GDLSGLREAVRDKEVEIGEVLENYNNIERECHAAKHSVCQEIRDRVQRLREDWREIRQDE
AGGEIGE