| New model in OGS2.0 | DPOGS211320 |
|---|---|
| Genomic Position | scaffold2292:- 38042-52184 |
| See gene structure | |
| CDS Length | 4134 |
| Paired RNAseq reads | 1225 |
| Single RNAseq reads | 9852 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004949 (0.0) |
| Best Drosophila hit | spindle E (2e-141) |
| Best Human hit | putative ATP-dependent RNA helicase TDRD9 (3e-158) |
| Best NR hit (blastp) | ATP-dependent RNA helicase, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | ATP-dependent RNA helicase, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0007140 male meiosis GO:0004386 helicase activity GO:0034587 piRNA metabolic process GO:0005524 ATP binding GO:0030154 cell differentiation GO:0007283 spermatogenesis GO:0071547 piP-body GO:0000166 nucleotide binding GO:0005515 protein binding GO:0016787 hydrolase activity GO:0005634 nucleus GO:0043046 DNA methylation involved in gamete generation GO:0009566 fertilization GO:0007275 multicellular organismal development GO:0003676 nucleic acid binding GO:0008026 ATP-dependent helicase activity GO:0031047 gene silencing by RNA GO:0005737 cytoplasm |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR007502 Helicase-associated domain IPR008191 Maternal tudor protein IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPR002999 Tudor domain |
| Orthology group | MCL11728 |
Nucleotide sequence:
ATGGAAGAACTTAAAGCGTTTTTTAACAATCCGTGCCCGTCAAATGCTCAAGTAATCAAG
TTGCGTGGACCTCTTACCGGTGGGCAAAGGATTACAAAAGATGATCCTATAAATGACTTA
AATAGACGAGAAGAACATCGCCAATCAGTTGTTATTAGTGGTACTGATTATGCTCGTGAA
GTAAAATTAAAAGAAACTGAAATGTATTTGAAGAATGAGCGAGAGCGTGAGAATTTCCAA
AGTATATCAGGCGGTTTAGACTCCATGGAACAATTATCATCATGGGGTGCATCATTTCAA
AACTTGGAGACGTTGACCAAAGAGGCCATGACACAAGTTTACAATAAATACTCCTTTCAA
ATGAAAGAAGACACAAAGAACTTAGCTATCAATGCCTATCATGACGATATTTTAGATAGA
ATAAAAGCATTTCCAGTAGTAATAATTGAAGGACCCACTGGGTGTGGGAAGACCACTCAA
GTTCCACAATGGATATTAGATGATGCATATAATAATAGGAAGCCATGTAAAATAGTGGTA
ACTCAGCCAAGGAAGATAGCAGCTATATCCATTTCGAGAAGAGTTGCTCAAGAAAGGGGT
TGGGATGTGGGAGGCCTTGTGGGCCTTGAAAACAGAACATCTAATGATACCAGAATACAT
TATGTTACAACAGGAGTACTGCTACAAAAACTTGTAAATGCTAAAAATATGAATGAATAC
ACACATGTGGTGCTGGACGAAGTACATGAGAGGGAACAAGATATGGATTTTTTATTATTG
GTAGTTAAAAAACTACTTTACACAGTATCACCAAGTGTCAAAGTCATCCTAATGTCTGCT
ACATTCAATTGTAGAGCATTTGCCGATTATTTCTTGATACCAACACCAGCTGGTTTGCAA
ATGTCTTCATGTTTGAAAGTCACAAATGATAAACCTGCATTCACTGTGAAGACGTTTTAT
TTGAATCACTTGACAAAGTTTGGAGCTATCTTACAACAATCGACACCTAAATCTAACGAG
CCAGTTATTTTGCCGCAAATGTACCACCTTGTCGTTAAACTGGTGAATGCGTTTGAAAAT
ATTGATAAACAAGAGGAGTATAGTGACAGGTCGGAGGCAGACCTGCCCTCAGTACTTATA
TTTCTGCCGGGCATACATGAAATTGAAGAGCTATATGCTTCTTTAATGGACATTGAACTG
AGGAAGAAAGTGGGTGATGAAGAGTGTTCTTCATACAAATGGTGGGTTCTGCCGCTCCAT
TCGACTATCACAGCTGATGAACAGGTGAGAGTATTCCAAAGAGCTCCACCGGGACACAGG
AAGATCATACTAGCTACAAACATAGCTGAGAGTTCCATCACTGTACCAGACATTAAATAT
GTTATCGACTTCTGTCTCATGAAAGTCTTGGTGGCCGATGAGAACACCAATTTCACGTCG
CTGCAACTATCCTGGGCGTCGAAGACTAACTGCGAGCAGCGTGCGGGCCGTGCGGGCCGC
GTCAGGGACGGCCGCGTCTATAGGCTGGTTCATGAGAAGTTTTATGACAACCTCCCCCAA
GAATGCAAGCCAGAGATCATCCGTTGTCCTCTAGAGCGTCTGGTCCTTCTGTCCAAAATG
CTGGACATGGGTACCCCGAGCGATATCCTCGCACTGGCTATGGACCCCCCTGACATGTCC
AACATACATCGGACCATATTGGTGCTTAAGGAGGTCGGTGCTTTAAAGAAGACGATGGAC
GGGGAGTGGTGTGTCTCGGACGGTGATATAACACACTTGGGACGAATAATGGCCAAGTTG
CCCCTGGACGTGAGAGTGTCGAAGCTGATCCTACTCGGATATATATACGGATGTCTCGAA
GAGGCTGTTGTTATGGCTGCCGGTTTGTCCGTGAAGAATGTATTCAGCAGTCCGTTCCGC
GAGCGCCTCAACGCCTACAACTCCAAACTGACGTGGGCCGACGGTTCAACGAGCGATTGC
ATTGCCCTACTTAACGTTTACAAGGTGTGGAATCATCTGCGTCAACAGAAGTATTTCAAG
CAGCAAGGCACCAACGAAGTGCAATGGGCGCGTCGGTTCTACGTTCAAGTGAGGGCGTTG
AGAGAGTTGGACGATATGGTGAAGGAGATACGGGCGAGGCTCTCGAGGGAGGGCATCCAG
CAGGGGACAGCCCCGTGGAACAAACAGGAGCTACCGCTGGTGCTGAAGGTTGTGCTAGCG
GGTGCATTCTACCCGCAGTACTTCACCCAAGCCAGCACGGACGAGTCCCGTGAGCGCGAC
GCGGTGAAGGTCGTGGGTGGGCTGGACCCGCGCGGATCGGTGTACCTCCGCGGGCTGCCG
GACGCTCAGCCGGCCGAGATATACCAGGCCGCGGTCCGAGCCGCCGTCCACAGGCTGCTG
GGAGACGAACCCAGGGTCACCGTTGACAGAAACAGCAGAAAAATTTACCTCACATTCCAA
GACAATGAAAGCTCCAAAACCGGCAATAAAGGAGGTGATCCTACAATTCCCGGTCAAGTT
TTGCTGCCTGTATATAAAGCTGTCAAAGCTAGACAACTTAAAATGGATGTCAGGATACCT
TTGTTACCACTGGAAAAAGCAATAGCTCTATCAGAAGCAATGAAGTCTAAATTAGTTGAT
ATGGATTTAAACGCCATGGTGCCCAGTCTGCCGGACATAGACGATACACATTTCGCTCTG
AAAATCTCTCAGTTTATCAACGTAGGCAAGTTCTGGGTTCAACACGATGACGAGTCTACG
AGGAATGAGCTTCGGGAGATCCAGAGGTCATTGAACTCTAGACCTCTTCTGGCTGTCACT
GGGGATGTGGCAGTGGACGATCTGGTGACAGCACCCTACGCTGATGGGACCACCACATTG
ATGTACCGCGCACGGATTATTAGGATACTGCCGAGAGATATGTTAGAGGTGCTGTACATC
GACTACGGCAGCGCAGGTCGCGTATCGCGCAGCAGTATACGCGTCCTGCCGCAGGTGTGC
TGCAGGCCGCTGGCCTTGTGCTGCAGGCTGGCTGGGCTGGCTCCCGCACCACTGCTCGAC
TCTCATACACACTGGTCACAACCAGCACAGAAGATGTTCACCGAGCTGGTGGGGAGAGGG
CGGCTCATTGCGAAGGTGTATTCAGTGACCCATGGCGTTGTGTCCATAGAATTGTTGTCG
GAAGGTGGTAAGATTAATATCAACAAGGAACTCCTGGACAAGGGCTATGCTGTGCCCTGT
GAAGAAAGCTATGATTCTAAGCTGAATCACGACCTTAGGGAGATGGCCACAGATTTGAAT
TTGGCGCAGAAGCGTGCGTACAACAAGGAACAAACCGAACTAGCTTTTACCCAACTACGG
GAGGTGGAAGCGCCCGTCTATAGGGAATATACATCAGATGTGTCCGAGGTGATATCCGAG
GCTCTGGCCACGTACTTCCCCAGCGGCGGGGTGCGCGTGATCGCGGAACCCGGTCGCTAC
TTCGCAGCAGCTGCTTACACTCTGTTCACGCTCGTACACGCCAAGAGACAGCTGCCTGCT
GACGGCGAGGAGGACCCTCACACCATGTACTTCATCAACGACGGTGTGTACGGCTCCTTC
AACTGTGTGCTGTACGACCATCAGGTAGTCACTCCAGAACTACTACAAGTAAACCATATC
CGCCACCTGATGGACTACATGCTGTACTGCAGCGAGGGTCAGGAATCGCCGGCCATGGAC
GACGAGCTAAGGGTCAACGTGCCCAAGTATATACGAGAAGATCTCATGCAGTTGCTACTG
AAACGTCGGAAACACCGTGAGACTGAAAGCGTTGTTAACGCCTGGGAATGGAAGTCTATA
CCGGAGGATGAGCTGTTGGAGATCACTATACCGGATATGGTTGAGAGAGCTGTCGTGTAC
TCATTGCACTTGCCATTAGAACTACGCCCAAAGGACAGAGACACTCTGCTGGCGTTGAAG
AGGGACAACGATGACCTCAAAATGAGAGTCAGCAGGTCGCTGGTGTCTAACGACACTGTG
CTAGTGTGCAAGCTGTGTGGATCGACGCCAATGCCGGTGCACTCGATGAGAATTCATCTC
AGTTCAAATTCTCATCGCGATAAAGAGGAAGACTTCAAAGCTGTGTTATCATAG
Protein sequence:
MEELKAFFNNPCPSNAQVIKLRGPLTGGQRITKDDPINDLNRREEHRQSVVISGTDYARE
VKLKETEMYLKNERERENFQSISGGLDSMEQLSSWGASFQNLETLTKEAMTQVYNKYSFQ
MKEDTKNLAINAYHDDILDRIKAFPVVIIEGPTGCGKTTQVPQWILDDAYNNRKPCKIVV
TQPRKIAAISISRRVAQERGWDVGGLVGLENRTSNDTRIHYVTTGVLLQKLVNAKNMNEY
THVVLDEVHEREQDMDFLLLVVKKLLYTVSPSVKVILMSATFNCRAFADYFLIPTPAGLQ
MSSCLKVTNDKPAFTVKTFYLNHLTKFGAILQQSTPKSNEPVILPQMYHLVVKLVNAFEN
IDKQEEYSDRSEADLPSVLIFLPGIHEIEELYASLMDIELRKKVGDEECSSYKWWVLPLH
STITADEQVRVFQRAPPGHRKIILATNIAESSITVPDIKYVIDFCLMKVLVADENTNFTS
LQLSWASKTNCEQRAGRAGRVRDGRVYRLVHEKFYDNLPQECKPEIIRCPLERLVLLSKM
LDMGTPSDILALAMDPPDMSNIHRTILVLKEVGALKKTMDGEWCVSDGDITHLGRIMAKL
PLDVRVSKLILLGYIYGCLEEAVVMAAGLSVKNVFSSPFRERLNAYNSKLTWADGSTSDC
IALLNVYKVWNHLRQQKYFKQQGTNEVQWARRFYVQVRALRELDDMVKEIRARLSREGIQ
QGTAPWNKQELPLVLKVVLAGAFYPQYFTQASTDESRERDAVKVVGGLDPRGSVYLRGLP
DAQPAEIYQAAVRAAVHRLLGDEPRVTVDRNSRKIYLTFQDNESSKTGNKGGDPTIPGQV
LLPVYKAVKARQLKMDVRIPLLPLEKAIALSEAMKSKLVDMDLNAMVPSLPDIDDTHFAL
KISQFINVGKFWVQHDDESTRNELREIQRSLNSRPLLAVTGDVAVDDLVTAPYADGTTTL
MYRARIIRILPRDMLEVLYIDYGSAGRVSRSSIRVLPQVCCRPLALCCRLAGLAPAPLLD
SHTHWSQPAQKMFTELVGRGRLIAKVYSVTHGVVSIELLSEGGKININKELLDKGYAVPC
EESYDSKLNHDLREMATDLNLAQKRAYNKEQTELAFTQLREVEAPVYREYTSDVSEVISE
ALATYFPSGGVRVIAEPGRYFAAAAYTLFTLVHAKRQLPADGEEDPHTMYFINDGVYGSF
NCVLYDHQVVTPELLQVNHIRHLMDYMLYCSEGQESPAMDDELRVNVPKYIREDLMQLLL
KRRKHRETESVVNAWEWKSIPEDELLEITIPDMVERAVVYSLHLPLELRPKDRDTLLALK
RDNDDLKMRVSRSLVSNDTVLVCKLCGSTPMPVHSMRIHLSSNSHRDKEEDFKAVLS