| Genomic Position | scaffold2292:+ 7548-20886 |
|---|---|
| See gene structure | |
| CDS Length | 2331 |
| Paired RNAseq reads | 902 |
| Single RNAseq reads | 2440 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004963 (8e-161) |
| Best Drosophila hit | CG31368, isoform C (8e-140) |
| Best Human hit | intron-binding protein aquarius (5e-132) |
| Best NR hit (blastp) | PREDICTED: similar to aquarius [Nasonia vitripennis] (5e-156) |
| Best NR hit (blastx) | PREDICTED: similar to aquarius [Nasonia vitripennis] (3e-151) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0008026 ATP-dependent helicase activity GO:0005524 ATP binding GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | ND |
| Orthology group | MCL14495 |
Nucleotide sequence:
ATGCTGAAATTTTATGCTCGTTTTGAGATCAGCGACGAAACCGGTGATCCCATGACCGAC
CGCGACATGACCTTACAGCACTATTCCAGAATAACATCACTACAGAAAGCTGCGTTTACA
AAGTTTCCCGATCTAAGATTGTTCTCTCTAGCAAACGTAGCAAGCGTTGATACCAGGGAA
TCTCTTCAGAAACACTTTGGGAATCTCAGTGATAAGGCATTAAGGGCCATTGCCACTTAT
CTGAATTTAGTTCCCACGGAAGGCAAGGAAGATGAAGCGCCTTGGCACAGACTGGACAAA
GATTTCCTCAGGGAACTTTTGATATCAAGACACGAGCGAAGAATTTCTCAGCTGGAAGAA
TTGAATTCAATGCCCCTATATCCCACCGAGAAGGTTGTGTGGGACGAGCACGTGGTGCCG
ACCGAGGTTTACAGCGGGGAGCGTTGCCTCGCCTTACCGAAACTTAATCTCCAATTCCTG
ACACTTCACGATTACCTGTTGAGGAACTTCAACCTTTTCCGCCTAGAGAGTACATATGAG
ATCCGTCAGGACATTGAGGATGCTGTTTATCGCCTGTCACCATGGAAATCTGAAGACGGT
ACTGTGATATTCGGAGGCTGGGCACGTATGGCTCATCCTATCCAAAGCTTCGCTGTGGTT
GAGGTGGCGAAACCGAATATAGGAGAGAAGGCGCCTTCAAGGGTCCGTGCTGACGTCACA
GTGACCCTCAGCGTCAGGAACGAGATCAAGCACGAGTGGGAGAGTCTCAGGAAGCACGAT
GTATGCTTCCTTATAACCGTACGGCCTAGCGAGGGTATAGGGACGAAATACGATTACAAG
AAAAGTATGGTCGACCAGGCTGGTATAGTCTACATCCGAGGTTGTGAGGTCGAGGGGATG
TTGGACGCCGGCGGGAGGGTCATAGAGGACGGGCCAGAACCTCGACCAGAACTAGAGGGA
GATTCCAGAACATTCAGGCTGCTGCTAGACCCTAACCAGTATAGGTTGGACCTTGACGAA
GCCAGCAAAGGAAAAGAGGTAATAATAGTGAGGTCTACAATGTTCGTCCTACCCTCATGC
TCACGCGACGATAAAACGATGACGCCGAGTGGCTTGACGAAACGGTTGTTGATCTTCAAC
CAAGCACTGTGCCAGCATCTGACTTGCAAGATGCTTTATATCCATTACGAAATTTGTCTA
GTTACTAAAAATACACGTGATATAGGAAGGGAGGTGGGGGTTAGTCTTAAAGGTCACTAT
GTATCACCAAGGGGGAGGGAGGGGACGAAATACGATTACAAGAAGAGTATGGTCGACCAG
GCTGGTATAGTCTACATCCGAGGTTGTGAGGTCGAGGGGATGTTGGACGCCGGCGGGAGG
GTCATAGAGGACGGGCCAGAACCTCGACCAGAACTAGAGGGAGATTCCAGAACATTCAGG
CTGCTGCTAGACCCTAACCAGTATAGGTTGGACCTTGACGAAGCCAGCAAAGGAAAAGAG
GATGTGTACGAGACATTCAATATCGTTGTCCGACGGAAGCCTAAAGAGAACAACTTTAAG
GCTGTTCTGGAGACGATACGAGAGCTGATGAACACGGAGTGCGTGGTGCCTGAGTGGCTT
CATGACATAGTGCTGGGCTATGGCGACCCTGGGCAGGCGCACTACACCAGGATGCCCAAC
GAAATCCCTACCCTGGATTTCAACGACACGTTCCTGGATATGGAACATCTACGGAACAGT
TTCCCGGGACACGAGATAAAGGTACAGACGGACGATCCGCGGAAACTCGTCCGACCGTTC
AAATTGACTTTCGAGAACGTTCTACGTAAACAGCGAGGCGAAACGGATATGGATGAAGAG
GAACCCAAGAAGGTTATAGTTGTAGAACCCCACGTGCTGCCCAAGAGAGGGCCGTACCTG
TACAATGAACCTAAAAAGAACAACATACTGTTCACGCCGACCCAGGTGGAAGCGATCCGT
TCAGGAATGCAGCCGGGGCTGACGGTCGTGGTGGGACCTCCCGGCACGGGTAAAACTGAT
GTCGCAGTCCAGATAATATCGAACTTGTACCACAACTTCCCGTCCCAGAGGACGTTAGTT
GTGACGCACAGTAATCAAGCTCTTAACCAGCTGTTCGAGAAGGTTGCTGAGCTGGATGTG
GACGAAAGGCACCTGCTGCGTCTTGGACACGGCGAGGAGGCTTTGCAGACGGACAAGGAC
TTCTCCAGGTATGGACGTGTGAATTACGTGCTGGCAAAGCGTTTGGAACTCCTCGGCCAG
GTGTCGCGTCTTCAGACCACGCTGGGGGCGGGGGGAGAGGCGGGTGGTTGA
Protein sequence:
MLKFYARFEISDETGDPMTDRDMTLQHYSRITSLQKAAFTKFPDLRLFSLANVASVDTRE
SLQKHFGNLSDKALRAIATYLNLVPTEGKEDEAPWHRLDKDFLRELLISRHERRISQLEE
LNSMPLYPTEKVVWDEHVVPTEVYSGERCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDAVYRLSPWKSEDGTVIFGGWARMAHPIQSFAVVEVAKPNIGEKAPSRVRADVT
VTLSVRNEIKHEWESLRKHDVCFLITVRPSEGIGTKYDYKKSMVDQAGIVYIRGCEVEGM
LDAGGRVIEDGPEPRPELEGDSRTFRLLLDPNQYRLDLDEASKGKEVIIVRSTMFVLPSC
SRDDKTMTPSGLTKRLLIFNQALCQHLTCKMLYIHYEICLVTKNTRDIGREVGVSLKGHY
VSPRGREGTKYDYKKSMVDQAGIVYIRGCEVEGMLDAGGRVIEDGPEPRPELEGDSRTFR
LLLDPNQYRLDLDEASKGKEDVYETFNIVVRRKPKENNFKAVLETIRELMNTECVVPEWL
HDIVLGYGDPGQAHYTRMPNEIPTLDFNDTFLDMEHLRNSFPGHEIKVQTDDPRKLVRPF
KLTFENVLRKQRGETDMDEEEPKKVIVVEPHVLPKRGPYLYNEPKKNNILFTPTQVEAIR
SGMQPGLTVVVGPPGTGKTDVAVQIISNLYHNFPSQRTLVVTHSNQALNQLFEKVAELDV
DERHLLRLGHGEEALQTDKDFSRYGRVNYVLAKRLELLGQVSRLQTTLGAGGEAGG