| New model in OGS2.0 | DPOGS201110 |
|---|---|
| Genomic Position | scaffold3609:- 44192-45061 |
| See gene structure | |
| CDS Length | 870 |
| Paired RNAseq reads | 1452 |
| Single RNAseq reads | 3985 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000125 (5e-18) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | three prime repair exonuclease [Tribolium castaneum] (4e-13) |
| Best NR hit (blastx) | three prime repair exonuclease [Tribolium castaneum] (1e-13) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0005634 nucleus GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0006281 DNA repair GO:0004518 nuclease activity GO:0004527 exonuclease activity GO:0006974 response to DNA damage stimulus GO:0008853 exodeoxyribonuclease III activity |
| InterPro families | IPR012337 Ribonuclease H-like |
| Orthology group | MCL25385 |
Nucleotide sequence:
ATGTCTATTAAAACTTTTGTATTGTTCGATATAAATACTATCGGATACACAGTTCAGGAT
CGAGATAACATTAAAATAGTAGAGTTCACATTAATGGCAGTCCCGAAAGAGAAAATTGTG
AAAAGTGGAAGCGGCGATTTCCAACCATCTAGGATAATGACAAAATTGATCAATCCGGAA
GTAGTTGGGGACATCAATAAAACTATTGCCAATCCTAGTTTGTCGGCCGATAAGTTAAAG
AATCAGCCGGTTTTTGGAGAGGTTATTAAGGATGTGAACGAATTCCTTGAAGATCTGCCG
AATCCTGTGTGTCTAGTGTGCTTACACGGTAACAGATTTGATTTTAAAGTATTAGTATCG
GAATATCAACAGGCACACGAAGCCTTACCCGACGGTCTACTGTGTGTTGATCCCAGAACC
TTCTTCACTATTCAAGTAGATGTGCAAGCTGATCCCATACCTGATGGCGAGGCCGGGCCA
ATGAACGAGCTGAATGTTTTGTTTCGCCAAATGACCACAAACAGAGGGGACAAAATAAAT
ATATCAAAATTATACAGATCTCTATTGAATACAGAACCTCCGCAATCACCGGGGACTGAG
ACCACGACCCATATGCTTCTACAGTGTGTTTTACGGCTCAAAGATAAATTCTTGCCTTGG
GCTGATCGGAATGCGAAACCTATTCTTAAAATTAAACCATATGGCCAACCTCAACCACAA
CATCAACCTCTTCCTGACAATCAGCCGGCCAATGAACCTGATGACCAGCCAGCTAGTGAA
AATGGCGACCAGAAAGACAGTTTATCTGATAACCAAAAGAACAAAGAGCCGGCGAATGAT
CATTGCAACGTATCAAACCAGACTGATTAA
Protein sequence:
MSIKTFVLFDINTIGYTVQDRDNIKIVEFTLMAVPKEKIVKSGSGDFQPSRIMTKLINPE
VVGDINKTIANPSLSADKLKNQPVFGEVIKDVNEFLEDLPNPVCLVCLHGNRFDFKVLVS
EYQQAHEALPDGLLCVDPRTFFTIQVDVQADPIPDGEAGPMNELNVLFRQMTTNRGDKIN
ISKLYRSLLNTEPPQSPGTETTTHMLLQCVLRLKDKFLPWADRNAKPILKIKPYGQPQPQ
HQPLPDNQPANEPDDQPASENGDQKDSLSDNQKNKEPANDHCNVSNQTD