| New model in OGS2.0 | DPOGS201754 |
|---|---|
| Genomic Position | scaffold1948:- 31090-32520 |
| See gene structure | |
| CDS Length | 1431 |
| Paired RNAseq reads | 242 |
| Single RNAseq reads | 759 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003752 (6e-79) |
| Best Drosophila hit | Rab11 interacting protein, isoform A (5e-63) |
| Best Human hit | rab11 family-interacting protein 1 isoform 3 (2e-17) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013604 [Tribolium castaneum] (2e-96) |
| Best NR hit (blastx) | PREDICTED: similar to lethal (1) G0003 CG6606-PA [Tribolium castaneum] (1e-87) |
| GeneOntology terms | GO:0015031 protein transport GO:0043231 intracellular membrane-bounded organelle GO:0042052 rhabdomere development |
| InterPro families | IPR008973 C2 calcium/lipid-binding domain, CaLB IPR000008 C2 calcium-dependent membrane targeting IPR019018 Rab11-binding domain , FIP domain, C-terminal |
| Orthology group | MCL16479 |
Nucleotide sequence:
ATGTGGGATCCAACTCACGTTCAAGTAACCGTGCAAAAAGCTAGAGGATTGTTAATTAAG
GGTAAAAACGGTACAAATAACTGTTTTGTTACAATCTCACTTGGTAAAGAAAAATTTCAA
ACTTCCGTAAAACACAAAGCTACGGAGAATGTTGAATGGTTTGAAGAATGTGAACTCCGC
ATTCCGACTCAAGGAAATACTGCAGAAATTGTTCTTAAAGTCTACGACGAAGACCTAATT
AAGGATCATTTATTAGGTCAGGTATCGATTCCCCTGAAAGACCTTGATGTGTATGAACGT
CCCAAAAACCGCTGGTATTCTTTACGAGGTAAAACAGGTAAAGAAAACGACAAAAACAGA
GGTGACCTAGAAGTAAAATTGGGTTTCACAGTTAAAGAAGGAAGTTTAACAGATCTTAGT
AAGAAGGAAAAACATAAATCATCGTTATCCAGTATTGCCCAAAATGTAGGTGGCAGTTTA
ATGAGCATTGGAAGCATAGAAAAACGAAAAAGCATTAAAAAATTGGCAAAAAATTTAGGC
TCCAAAATGAACCTTACTAATAAAAAAGATAAAAAGAGTGACTCATCTTCTCTAGGAGGA
AGTATTGGAAACTTAAGAGGCTCCATTCTTTCCACTCCTGATACATCCACTCCAAAAAGA
TCTTCTGCAGAAGCCGATCCAGGTGTAATCAGTGAAGATGAAGATGAATTTGCATTTGAT
GATTTATCTCATAAAAGCTCCGGTAGTTCACTTAATGTGCAATCCTCATATTTACCCAGA
GGAGTGAAATACACACCATCTCCAATCAATGCTTCTCTTGAAAATTTAGGTGGTGGTGAA
TTTTTACGAAGATCTACCAGTAGTACTTTAGCAACAACAGAAAAAGCAGCTCCCCTTAAA
CCAGTCCGTCTGAGTCTGGACACATTCCATGCTCCACAATTACCAATACAAGTACCTGAT
AAAGATGATGAATGGTCCCAAAAATTATATCCTAGAAAATCTATCAGTCAAACAATGATA
GATAGAGAGAAATCGTCTAGTCTCGAGAGGAACAAAAAGCTTGATAGTCCTAGTTCCTTA
AAAGAAAAACCTAGTCCAAAGTTTTTCAAAAAATTTGGAAACAACAAACCTAAAAAGTTA
CTTGAGGAGCGTATTATTGTAGGAGAAGAGAATATAGTTGAAGAGGATTCCATTAATCCT
GCATACAATAACATACCAAAAACAATCGTACAACAATTTGATGACATGACCCGTGAGGAT
TTAATTGTTGCTATTTACAACTTGCAGAAGGATGTTGAATCAGAAAAGAAGAAAAATAAG
GATCTGGAAAATTACTTAGATGATCTGTTGCTGAGGGTTATGGAAACTACCCCAAGAATT
TTACAAAATCCTTACGTCAGAAACAACAGCATGCATATTAGAAACAAGTGA
Protein sequence:
MWDPTHVQVTVQKARGLLIKGKNGTNNCFVTISLGKEKFQTSVKHKATENVEWFEECELR
IPTQGNTAEIVLKVYDEDLIKDHLLGQVSIPLKDLDVYERPKNRWYSLRGKTGKENDKNR
GDLEVKLGFTVKEGSLTDLSKKEKHKSSLSSIAQNVGGSLMSIGSIEKRKSIKKLAKNLG
SKMNLTNKKDKKSDSSSLGGSIGNLRGSILSTPDTSTPKRSSAEADPGVISEDEDEFAFD
DLSHKSSGSSLNVQSSYLPRGVKYTPSPINASLENLGGGEFLRRSTSSTLATTEKAAPLK
PVRLSLDTFHAPQLPIQVPDKDDEWSQKLYPRKSISQTMIDREKSSSLERNKKLDSPSSL
KEKPSPKFFKKFGNNKPKKLLEERIIVGEENIVEEDSINPAYNNIPKTIVQQFDDMTRED
LIVAIYNLQKDVESEKKKNKDLENYLDDLLLRVMETTPRILQNPYVRNNSMHIRNK