| New model in OGS2.0 | DPOGS201755 |
|---|---|
| Genomic Position | scaffold1948:- 22019-28545 |
| See gene structure | |
| CDS Length | 1038 |
| Paired RNAseq reads | 216 |
| Single RNAseq reads | 739 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002650 (1e-66) |
| Best Drosophila hit | CG10399 (2e-95) |
| Best Human hit | hydroxymethylglutaryl-CoA lyase, mitochondrial isoform 1 precursor (2e-88) |
| Best NR hit (blastp) | hydroxymethylglutaryl-CoA lyase [Bombyx mori] (8e-155) |
| Best NR hit (blastx) | hydroxymethylglutaryl-CoA lyase [Bombyx mori] (4e-151) |
| GeneOntology terms | GO:0004419 hydroxymethylglutaryl-CoA lyase activity GO:0005759 mitochondrial matrix GO:0006551 leucine metabolic process GO:0005875 microtubule associated complex |
| InterPro families | IPR000891 Pyruvate carboxyltransferase IPR013785 Aldolase-type TIM barrel |
| Orthology group | MCL11968 |
Nucleotide sequence:
ATGATTGTTAGTGGAGATCTTGTAATTAAGGGCTTGTACATCTGCATTCCCGAAAATATC
AACAACGCTAAAATTGACGATAACACGAAGGACAGTCAAGCGGTTCCAGATATTCGAATA
TACGAAGTAGGTCCAAGAGACGGTCTTCAAAATGAGTCTAAGTTTGTACCAACTGATATA
AAAGTAGAACTTATTCACAAACTCTCTGAAGCAGGAATCAAAGATATTGAATGTGCCAGC
TTTGTAAGTCCAAAATGGGTAAAACAAATGAGTGATGGTACTGAAGTTATGAAAACTATC
AAAAGGGTACCTGGTGTTAACTATCCAGTATTAATACCCAATCTAAAAGGATATGAGGCA
GCTAAACAATGTAATATTGAAGAAATAGCAATATTTCCTGCTGGTTCAGAGGGTTTCTCT
CAGAAGAATTTAAATTGTTCTATAGAAGAAGGATTAAAACGGTTCAAACTGGTCGCTGAT
CAGGCTATTAAAGATGGAATGAGAGTCAGAGGTTACGTTTCATGTGTTGTAGGCTGTCCC
TATGATGGTCCAATAAATCCAAAAGGGATTGCCAAGATAACTGAAGAGTTGTTTACAATG
GGTTGCTATGAGGTATCACTGGGTGACACTATCGGAGTGGGAACGGCCGGATCGGTGAAG
AAATTAATGAATGAGGTTATAAAAGTAGCAACACCTGACAAAATAGCACTTCACTTCCAT
GATACATATGGACAGGGGCTATCTAACTTACTGGCTGGCTTGGAGTTCGGAATTAAAACT
GTGGATTCGTCTGTGTCCGGACTTGGCGGGTGTCCGTATGCCCGTGGTGCGAGCGGGAAC
CTTGCTACTGAGGACCTTGTATACTTTCTCTACGGGCTAGGAGTGAACACTAACATAGAC
CTGGTCAAACTCATAGAAGCTGGCCGCTACATATCAAACTTCCTCGCAAAACCGACCGAG
TCCAAAGTCAACCGTGCCATCGGGGATAGATTTAAAAATCATAAAGATATTATAAAAATA
GCGTCTTGTACTTTATAA
Protein sequence:
MIVSGDLVIKGLYICIPENINNAKIDDNTKDSQAVPDIRIYEVGPRDGLQNESKFVPTDI
KVELIHKLSEAGIKDIECASFVSPKWVKQMSDGTEVMKTIKRVPGVNYPVLIPNLKGYEA
AKQCNIEEIAIFPAGSEGFSQKNLNCSIEEGLKRFKLVADQAIKDGMRVRGYVSCVVGCP
YDGPINPKGIAKITEELFTMGCYEVSLGDTIGVGTAGSVKKLMNEVIKVATPDKIALHFH
DTYGQGLSNLLAGLEFGIKTVDSSVSGLGGCPYARGASGNLATEDLVYFLYGLGVNTNID
LVKLIEAGRYISNFLAKPTESKVNRAIGDRFKNHKDIIKIASCTL