| New model in OGS2.0 | DPOGS201757 |
|---|---|
| Genomic Position | scaffold1948:- 7031-16902 |
| See gene structure | |
| CDS Length | 2019 |
| Paired RNAseq reads | 802 |
| Single RNAseq reads | 2186 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002652 (0.0) |
| Best Drosophila hit | CG18304 (3e-48) |
| Best Human hit | hypothetical protein LOC140710 isoform 1 (2e-08) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013627 [Tribolium castaneum] (3e-136) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013627 [Tribolium castaneum] (2e-122) |
| GeneOntology terms | GO:0005840 ribosome GO:0006412 translation GO:0003735 structural constituent of ribosome |
| InterPro families | ND |
| Orthology group | MCL16634 |
Nucleotide sequence:
ATGCACCATATGTATCCAATGGCTAAAGGAGATCCGCTCTGTCCCTTGGGCTTCCACCCG
CAAGTGCGATGGCCGACTCGCTGCAAGCGCTGCTTCCGCGACTACAAGGAACACGGTGGT
CGTAAGAAGGAAGATGATTTTGCTGCATCAACACCGAGCCTCTCTTCTTGGAACTCGCCC
TCATCACGAAGTCGTGACGAAAACAATGGTGCTGAGGTAGAGAAGACAGGTCGCGGTTGG
GCTTCGAGCACAAACCTCAGTATCACTGAAGTATCCAAAAAAGACGACATAACAATAGGG
CTCAATAAGAAGAGCACATCGTGGACGTCAACACCAGACTTGGGTTCAAATGAAGAGGAT
AATACAACTGCTGTAACATTTAGTCTTAAATTACCCAAACGAAGATCTACAGGTCCTTTA
CCATCTCTAGATACAGGACAGAATAATACAGAAACGGTAACAGTACGTCGACCATCTCCC
TCGCCACCACCAACCGTCAAACAACCAGACAGCCAGCCTTCTATAGCTCAGATAACTATC
AATAAAAACGATTCGCTTGCAGAACGAGTTCGAAAGATGCAATTAATGAAAGCTCAAAGC
AGCTTTGACAAAGAGTCTAGCGTTGAGAAGGAAAGAGAAAGGAGAAGTGCCTCTCGAAGT
AAGGAAGAAGAAAAGTCCGTGAAACCAAAAGAAGAAAAGAGTTACAGTAAGGAAGACGTT
AGTATATCGCTGGGAAAAACTCGTAATCAATCCATATCAAAGCCTCCTATTAGGGGAGGA
CCTATATCTCGAGATAAGGAAGAATCGGAGGATGAAGGCAGCACTATCACAACAGACACA
GATGTAACACTTGTCGATCCGAACATAAAAGAGTATCAGGAACAAATTGAAAGCCTAAAG
TCAGAAGTAGATTTTCTGAAAAAGCGTTGTGAACGTGTTGAGAAAGAAAAGAGTGACATT
CTATTAAGAAGACTAGCTAACATAGATAACACTAATAAATATTCCACTGGACGATCTTCA
GAAAATCTTAAGTTACAAAAGAAGGTTAATGAACTTACAACACAAAACGAAGACCTAAAG
GATGAAAAGAAACATTTATCTCTACGGATTAAAGAAATGGAGGTAGAATTAGAATCTCGT
CCATCAATTGAGGCACAAACAAAACAAATTGAACAACTCAGAGCAAAGTTATTGGCTGCA
GAAACTCTGTGTGAGGAATTGATGGATGAAAATGAAGACATGAAAAAAGAATTACGAGAT
CTTGAGGAAGAAATAGAAGAAATGCAGGACAACTTCAGAGAGGACCAAGCAGATGAATAT
TCTTCGTTAAGAAGAGAATTAGAACAAACAATAAAAAACTGTAGAGTGCTATCATTTAAA
TTGAAAAAAACGGAGCGAAGGGCCGAGCAACTTGAACAAGAAAAAGCGGATCAGGAGAAA
AAGCTTTTAGAGATTGTAGGAGGTGCTGACGGTCTACAGAGAGAGAATCGAATCAAGGAA
TTGGAACAAGAAGTAGCGCGGTCTACTGAAGTTGCTCTGCGACTGCAGCGTGAATTGGCA
GAAGCGAAGACTAAATCATCTTCTGTTTCTGGTGTTCCGCCTGCCAATGTTAAGAAGCAA
ACAACTGACGGAAAGATTTCCCGATCGTCACTAACACGAGGTGGAAGCCAAGAAGATGCA
GCGCAATTGCTTCGGGATCTTCAAGACTCTTTGGAACGCGAAGCTGATTTAAGAGAACAA
CTACGCAACGCTGAAGAAGAGGCCATTCGATACCCTGGAAGCTTCAGTGATAAACGGAAT
CTTCCACCACCGCATTCACCGCCAACACAGCTTCATCCTCCGCCTAACCTTGCTGTCACT
GATAATAATAACAAATCGATGCTAGAAATTCAAAGAATGCAACATGTTCTCGAAAAAAAA
TTATCCTCATTGGATATCAACAAATTATCTATTGGCATTAGTGAATCCCATCAAACTCCC
CAAGATTACATTGATTCTTATTCTGAAGGATGTCATTAA
Protein sequence:
MHHMYPMAKGDPLCPLGFHPQVRWPTRCKRCFRDYKEHGGRKKEDDFAASTPSLSSWNSP
SSRSRDENNGAEVEKTGRGWASSTNLSITEVSKKDDITIGLNKKSTSWTSTPDLGSNEED
NTTAVTFSLKLPKRRSTGPLPSLDTGQNNTETVTVRRPSPSPPPTVKQPDSQPSIAQITI
NKNDSLAERVRKMQLMKAQSSFDKESSVEKERERRSASRSKEEEKSVKPKEEKSYSKEDV
SISLGKTRNQSISKPPIRGGPISRDKEESEDEGSTITTDTDVTLVDPNIKEYQEQIESLK
SEVDFLKKRCERVEKEKSDILLRRLANIDNTNKYSTGRSSENLKLQKKVNELTTQNEDLK
DEKKHLSLRIKEMEVELESRPSIEAQTKQIEQLRAKLLAAETLCEELMDENEDMKKELRD
LEEEIEEMQDNFREDQADEYSSLRRELEQTIKNCRVLSFKLKKTERRAEQLEQEKADQEK
KLLEIVGGADGLQRENRIKELEQEVARSTEVALRLQRELAEAKTKSSSVSGVPPANVKKQ
TTDGKISRSSLTRGGSQEDAAQLLRDLQDSLEREADLREQLRNAEEEAIRYPGSFSDKRN
LPPPHSPPTQLHPPPNLAVTDNNNKSMLEIQRMQHVLEKKLSSLDINKLSIGISESHQTP
QDYIDSYSEGCH