| New model in OGS2.0 | DPOGS212632 |
|---|---|
| Genomic Position | scaffold2362:- 7476-15503 |
| See gene structure | |
| CDS Length | 1923 |
| Paired RNAseq reads | 792 |
| Single RNAseq reads | 1877 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005197 (0.0) |
| Best Drosophila hit | mediator complex subunit 17 (0.0) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 17 (2e-132) |
| Best NR hit (blastp) | PREDICTED: similar to Mediator complex subunit 17 CG7957-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Mediator complex subunit 17 CG7957-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0016592 mediator complex GO:0006366 transcription from RNA polymerase II promoter GO:0005634 nucleus GO:0016455 RNA polymerase II transcription mediator activity GO:0045498 sex comb development GO:0006367 transcription initiation from RNA polymerase II promoter GO:0009987 cellular process GO:0003713 transcription coactivator activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0033613 transcription activator binding GO:0010552 positive regulation of gene-specific transcription from RNA polymerase II promoter |
| InterPro families | IPR019313 Mediator complex, subunit Med17 |
| Orthology group | MCL14016 |
Nucleotide sequence:
ATGGCAAATTCTGTAAACATATCGATAGAGGCACCTATAGAGAATCAAATTCAAGAAATT
ACTTACGATGGCCAAGAAATTTATCAAGCTCCCCTTTCTATGTCTGAAAACCTGGCAAGA
TTAGCACAGAAAATAGATTTTTCTAAAACTGATGACGAATTCTGCAACATAAAGAAAGAA
GGTGACATCGGTTCTGAAGTGAAGTCAGAGGAAGACAAAGAACCTGGCTATCAGTCCAGT
TTATGGCCTTGGGATTCTGTCAGGAATAAATTAAGAAATGCCCTCACGGAAGTATCTGTT
CTTGCTGATGTGTTGAGCATTGCTAAGGAAAAGAGATATATGGTACTAGATCCAATTCAG
GCCGATCCCATAGAAAGCCGTCCGATGGTTCAAGTGTATGGTCGTAAGAAAGCTCTGTCC
GCTGCCGGGGCAGTGCTACTCAATGGAGTGGAGAGACTCAGAGCGAGTGAGACCATGAGG
ATGACTCGCAACATGCCAGACTTCCACATAGACCTGCTGAGACTCAGACAGAACTGGAGA
CTCAAGAAGGTCTCCAACACTATAGTCGGTGATTTGAGCTACAGAACCGCCGGATCTAAG
TTCAGTCAAACCGGTGTTTTTGAGGTGACGAAGGCTCCCGAGGAACAGATCGCGGCCGCT
ATGAACGCGCCGGGGGCTGCGCCCTCCGCTCTCAGAGTCACCGTGCCGCCTGAACTACAG
GGCGTAGCGTTTATATCCGTCCGATGCCAGAAAGAACAAGAGGACGTGGTGACTGCGACC
CTCAACTCCTCGGCTCTGAACTGCCCCGGCTCGCTGCCCGGGGACGGCGCGGAACTGCAT
TGGCAGCAGAAGCTAGAAGCAGCACAGAACGTCCTCTACTGCAAGGAACTGTTCGCCAGG
CTCGCGGCAGAAGCGGTTCAACTGGACGCGTCCATACCACACATAGTGGTCGGCAACAGG
ATCATGCTGACCATCCTGCCCAGCATACAATTGATGATCGGTCTCTGTCACAATAACGGC
CAAAATAACAACAACACAGAGGGCACCAAGTCTCAGGGCTCGTACGTGAAGGCTGAGCAC
GACCACGTATTGGAGCACTCCCTCCACCAGCTGCTGCGAGCCGTCCATCACTCCAACACT
CACCATCCCTTCCCTCACCCGGCCACGGGACCTCTCGGACCATCGAAGAGGAGATCGCTG
GCTGGTCCTATGGGCGCGGACCGCTATGAACTAATGGAGATGTCCCGCGAACAGTCCCTC
CTGGAACAGATCGTGCAGCAAGCGCAGCACTTCTTCATGAGAAGGCGCGGGGAGTACGTA
CTGGATACCATCGCCAAGGAGGTGAAGGATCCCCTCATAGTGTCACACTGGAACGCTCTA
AACAGCCCTACACACTCTTGCGTTAAAATTAATATTATGGCTTATGGGTACGACGCAGTA
TGTCGAACATCCCTGGTGGTTCATGTCGGAGAAAAAACTTTAAAATGCATCTGTAGGGAC
GGTAAAGTAAGGAATCTGTCCTACGAGCTGCAAGAATTAAGGGATCTTATTTTCTGTCAG
ATCTACCAGCACCAGATGACGGGCGTGCAGGCGGTCGGTCGCTGTATGGGCTGGCAACTG
CTGGCCAGTTCCTCACACCTGGGCGCTGGACCCGTGGAACCACTAGCTAACGCATCTTCC
TGTCTGCTAGCCTCTCCCAATGGTGATAGAATGATAGCTATAAGATGTGAACCATCGGTC
GGAATCCAAGTGTTTATAGCACAATCGCCAAAAAAAGACTTCTTTGTTAGTGAATTAGTT
CAAGACAAGAAATGGGAAAACCTTGGTGGTGCCTTCAAGGAGGTTAAACTGGAAAAGATG
GAAGGCAAGAACTTTCTAAACAAAATGGAGTTACTAATGGCTTGCTTGAGCAGCCCTTCA
TAG
Protein sequence:
MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTDDEFCNIKKE
GDIGSEVKSEEDKEPGYQSSLWPWDSVRNKLRNALTEVSVLADVLSIAKEKRYMVLDPIQ
ADPIESRPMVQVYGRKKALSAAGAVLLNGVERLRASETMRMTRNMPDFHIDLLRLRQNWR
LKKVSNTIVGDLSYRTAGSKFSQTGVFEVTKAPEEQIAAAMNAPGAAPSALRVTVPPELQ
GVAFISVRCQKEQEDVVTATLNSSALNCPGSLPGDGAELHWQQKLEAAQNVLYCKELFAR
LAAEAVQLDASIPHIVVGNRIMLTILPSIQLMIGLCHNNGQNNNNTEGTKSQGSYVKAEH
DHVLEHSLHQLLRAVHHSNTHHPFPHPATGPLGPSKRRSLAGPMGADRYELMEMSREQSL
LEQIVQQAQHFFMRRRGEYVLDTIAKEVKDPLIVSHWNALNSPTHSCVKINIMAYGYDAV
CRTSLVVHVGEKTLKCICRDGKVRNLSYELQELRDLIFCQIYQHQMTGVQAVGRCMGWQL
LASSSHLGAGPVEPLANASSCLLASPNGDRMIAIRCEPSVGIQVFIAQSPKKDFFVSELV
QDKKWENLGGAFKEVKLEKMEGKNFLNKMELLMACLSSPS