| New model in OGS2.0 | DPOGS214796 |
|---|---|
| Genomic Position | scaffold7337:+ 501-4815 |
| See gene structure | |
| CDS Length | 1698 |
| Paired RNAseq reads | 576 |
| Single RNAseq reads | 1828 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012107 (0.0) |
| Best Drosophila hit | Hpr1 (5e-124) |
| Best Human hit | THO complex subunit 1 (3e-105) |
| Best NR hit (blastp) | PREDICTED: similar to Hpr1 CG2031-PA isoform 1 [Apis mellifera] (1e-176) |
| Best NR hit (blastx) | PREDICTED: similar to Hpr1 CG2031-PA isoform 1 [Apis mellifera] (2e-157) |
| GeneOntology terms | GO:0005654 nucleoplasm GO:0007165 signal transduction GO:0005515 protein binding GO:0006406 mRNA export from nucleus |
| InterPro families | IPR021861 THO complex, subunit THOC1 |
| Orthology group | MCL14035 |
Nucleotide sequence:
ATGTCCGAAAAAGTTGGATTTGATGAGTTGCGGCTTAAGTATAAGGATGTATTATCAAAA
GCATTTACTACAAATAATATCGATTTGCTCGATTCCTTTTCAAAAAATGCGAATGAGAGC
GACAGAAAATCAGCCATGGACCAAGCCTTTAGAGATAAACTACTGGATTTGCTATTAGAG
GAGCCAAATACCTTGGAAAGCTATGTAAATTTTTGTATAGACTCATGTCGAAGGCAAATG
GTGACTGCAACTATGCCTGTAGTTCTTTTGGGTGATATTTTCGATGCACTAACACTGAAC
AAGTGTGAAAAAATGTTTATGTATGTTGAAAATGGAGTAAATATATGGAGGGAAGAATTA
TTCTTTGTGGCATGTAAGAACCATTTACTAAGAATGTGTAATGACTTACTGAGAAGATTA
TCAAGATCTCAAAATACGGTATTCTGTGGCAGAATATTGTTATTCTTAGCCAAATTCTTT
CCATTTTCTGAGCGCTCTGGGCTTAATATTGTGTCCGAATTCAACTTGGAAAATATTACG
GAGTTTGGTGGTGATAATACAAGTACCTTAAAGGATGTATTGGATGAAGAAATGGTTGTT
GAAGATGATAAAAATAAATTGGTCATAGATTACAATCTTTACTGTAGATTTTGGAGCTTA
CAGGACTTCTTTAGGAACCCTAACACATGTTATAATAAATTACAATGGAAAACCTTTGTT
GCGCATTCAGGCAGCGTCCTATCAGCTTTCTCCTCATACAAGCTAGAGGCTGTGGAGTTG
CAGAAATCGAAATTAAATATACTTAAATCGGTAAACTCGGATGTTGAAATGCAAGAGAAC
AAAGAGCAACATTACTTTGCAAAGTTTCTAACAAACCAGAAACTTTTGGAGTTACAGTTG
TCTGACTCAAATTTCAGGAGATGTGTCCTGATACAGTATCTGATACTCTTTCAATATTTA
ATGTCGACGGTAAAGTTTAAAATGGAATCTCAGGAATTAAAATCAGATCAGATAGACTGG
GTGAAAGACACCACAGCCCTTGTTTATAAGCTCCTCGGTGAAACTCCGCCCGACGGCAAA
CAGTTTGCTGAATGCGTGAAGAGAATATTGAAGAGGGAAGAACATTGGAACAGTTGGAAG
AACGATGGATGTCCAGAATTTCAAAAGCCAAAACCTCCGGTGCAAGCGGAGAACGAGGAG
GTGAAGCGTTCGAGGAAACGACGTCGGCCTGTTGGAGATATTATTAAAGAATATTCTGGA
ACCGACAAGTTCTTCATGGGGAATAATGACCTGACAAAGTTGTGGAACCTCTGTCCGGAC
AATCTAGCTGCTTGTAGAACAAAGGAAAGAGATTTCATGCCATCACTAGAATCATATATG
TTATCTGGTGATGGTGGTGAGGGTGCTGGTGGGTGGGGGTGGCGAGCTCTGCGTCTGCTA
GCAAGAAGGTCACCACACTTCTTCGTCCACACAAACAATCCCATCGGACGGCTGCCGGAT
TATCTTGATGATATGGTTAAAAAAATCACTCGTGAAGTGGCCGCCAATAATGTGTCCAAT
AACACAAACGGTGACTCCAACGTTAACAACGATAAAGCTAAGCTGGAGCAGACTGAAGAA
GAACTGACAGAAGAGCAAATAGAAACTGATATTATAAAGGAAGAAGACACGACCGACCTT
GAACAGGTGACTGTGTGA
Protein sequence:
MSEKVGFDELRLKYKDVLSKAFTTNNIDLLDSFSKNANESDRKSAMDQAFRDKLLDLLLE
EPNTLESYVNFCIDSCRRQMVTATMPVVLLGDIFDALTLNKCEKMFMYVENGVNIWREEL
FFVACKNHLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENIT
EFGGDNTSTLKDVLDEEMVVEDDKNKLVIDYNLYCRFWSLQDFFRNPNTCYNKLQWKTFV
AHSGSVLSAFSSYKLEAVELQKSKLNILKSVNSDVEMQENKEQHYFAKFLTNQKLLELQL
SDSNFRRCVLIQYLILFQYLMSTVKFKMESQELKSDQIDWVKDTTALVYKLLGETPPDGK
QFAECVKRILKREEHWNSWKNDGCPEFQKPKPPVQAENEEVKRSRKRRRPVGDIIKEYSG
TDKFFMGNNDLTKLWNLCPDNLAACRTKERDFMPSLESYMLSGDGGEGAGGWGWRALRLL
ARRSPHFFVHTNNPIGRLPDYLDDMVKKITREVAANNVSNNTNGDSNVNNDKAKLEQTEE
ELTEEQIETDIIKEEDTTDLEQVTV