| New model in OGS2.0 | DPOGS211281 |
|---|---|
| Genomic Position | scaffold1742:- 37107-39063 |
| See gene structure | |
| CDS Length | 630 |
| Paired RNAseq reads | 16 |
| Single RNAseq reads | 141 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012463 (9e-53) |
| Best Drosophila hit | Rab27, isoform C (3e-66) |
| Best Human hit | ras-related protein Rab-27B (3e-64) |
| Best NR hit (blastp) | PREDICTED: similar to Ras-related protein Rab-27A (Rab-27) (GTP-binding protein Ram) (Ram p25) [Tribolium castaneum] (1e-75) |
| Best NR hit (blastx) | PREDICTED: similar to Ras-related protein Rab-27A (Rab-27) (GTP-binding protein Ram) (Ram p25) [Tribolium castaneum] (8e-74) |
| GeneOntology terms | GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport GO:0000166 nucleotide binding |
| InterPro families | IPR020851 Small GTPase IPR001806 Ras GTPase IPR005225 Small GTP-binding protein IPR013753 Ras IPR003579 Ras small GTPase, Rab type IPR003577 Ras small GTPase, Ras type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase |
| Orthology group | MCL16416 |
Nucleotide sequence:
ATGGACTACGATTATCTTATAAAACTTCTCTGTGTTGGTGATTCCGGCGTTGGTAAAACG
AGCTTTTTGTATAAATACACTGATGGAGTTTTTCACACTCAATTTATTTCAACAGTTGGT
ATTGATTTCCGGGAGAAAACTGTGATATATCAACAAAATTCTAGACAGCATCGCATTCAT
CTACAACTTTGGGATACAGCTGGACAAGAGAGATTCAGGAGCTTAACAACAGCTTTTTAT
AGAGATGCAATGGGTTTCTTGCTTCTCTTTGATTTAACCAATGAGGCTTCTTTCTTAGAA
GTTAGGAATTGGATTGAGCAATTGAAGACACACAGTTTGAGTGACGACCCTGACATAGTT
CTGTGCGGTCACAAATGTGACCTTCAAGAGAAGAGACTAGTCAATCAGAATCGAGCTAGA
GAATTTGCAAAAAACTATAATTTGCCATACTTGGAGACGAGTGCCAAAACGGGACAAAAT
ATTGAGCGTGCCACTGAGATACTCCTGGATAGAATTATGTACAGAATGGAGTCGTCAGTG
GAATATGCTATGCTATGTGCGTCTGGACGTAGGAGGCAATCATTACAAAGATTACAAGCG
AAACAAGACAGGAAGCTGTGTTTGTGTTAA
Protein sequence:
MDYDYLIKLLCVGDSGVGKTSFLYKYTDGVFHTQFISTVGIDFREKTVIYQQNSRQHRIH
LQLWDTAGQERFRSLTTAFYRDAMGFLLLFDLTNEASFLEVRNWIEQLKTHSLSDDPDIV
LCGHKCDLQEKRLVNQNRAREFAKNYNLPYLETSAKTGQNIERATEILLDRIMYRMESSV
EYAMLCASGRRRQSLQRLQAKQDRKLCLC