New model in OGS2.0 | DPOGS201926  |
---|---|
Genomic Position | scaffold562:+ 536-8296 |
See gene structure | |
CDS Length | 1590 |
Paired RNAseq reads   | 1610 |
Single RNAseq reads   | 8295 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002660 (0.0) |
Best Drosophila hit   | CG9701 (6e-125) |
Best Human hit | lactase-phlorizin hydrolase preproprotein (9e-103) |
Best NR hit (blastp)   | glycoside hydrolase [Culex quinquefasciatus] (2e-151) |
Best NR hit (blastx)   | glycoside hydrolase [Culex quinquefasciatus] (8e-146) |
GeneOntology terms    | GO:0043169 cation binding GO:0005975 carbohydrate metabolic process GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds |
InterPro families    | IPR017853 Glycoside hydrolase, superfamily IPR001360 Glycoside hydrolase, family 1 IPR013781 Glycoside hydrolase, subgroup, catalytic core |
Orthology group | MCL10077 |
Nucleotide sequence:
ATGAACGTTAGAATATTATTTAAAAACATTGATTTTTTTATCAGGCAAGCGGAAGTATTA
AATTTAGCTGGAGGCGCAAAGTCTAACTACACTTTTCCGAAGGATTTTCTTTTTGGTGTC
TCAACAGCGGCAATACAAATTGAAGGAGCATGGAATGAAGATGGGAAGACGGAAAGCATA
TGGGATCACTTAGTGCGTGTAAATCCTAACTTCACTAAAGACGGATCTACCCCTGACGTA
GCAGCAGATTCCTATCATTTATACAAGAGAGATGCTGAAATGGTCCACGAACTTGGAGTG
AATATGTATAGGTTTTCAATATCCTGGCCAAGGATACTACCAACTGGTTTAGCCAATCAA
GTTAATCCTCTCGGAATTGAGTACTATAAAAATCTCATAAGCGAGTTGGAAAGGTACAAT
ATTACTCCTATGGTCACCATTTACCATTGGGATCTACCTCAGAAATTACAGGATATTGGG
GGTTGGACGAACGCGCATATCATAGATTATTATACGGACTACGCGAATGTATTGTTTGAA
AATTTCGCGGATAAAGTTAAATATTGGATAACATTCAACGAGCCAATGCAAACCTGCCTG
GAAGGTTACGGCAACACGTACCGAGCGCCTGCACTGAACCGACACGGTATAGCTGAATAT
CTGTGCACACACAATTTGTTAAAAGCGCACGCAAGCGTTTACCATTTGTTCAATAAGCAG
TATCGTCCACTGTATGGAGGGAAAATGGGTATGTCACTGGACTCTAATTGGGCAGAACCC
AAAACAGATACACCAAGAGACAAGAAAGCTGCGGAGTTGTACCTTAAAACTCATCTTGGA
TGGTATGCACATCCTGTATATTCGGAAACTGGAAATTATCCAGAAGAGCTTATCAAACTT
GTTGATGAAAAAAGTAAGAAACAGAACTACACCCACTCTCGACTTCCCAAGTTTACTCCT
GAGGAAATAGCCTATATACGAGGAACTGCAGACTTCTTCGGTTTAAACCATTACACCACG
TATCTTTTGAGCATGGCTGACAGTGAAGTTGGTGAGGTGCCATCACATGCAAACGATGTT
GGTATTGTTAGGGTTCAAGATCCCAAGTGGCCGTCGAAGTCCTCTTCCTCTTGGCTAAAG
GTGGTGCCATTTGGATTTCGTCGCCTCTTAAATTGGATAACTAAAACGTACAATAACGTG
CCAATAATCGTTACGGAGAACGGATATGCTGACTTTAGTGGAGTGAAAGATGAAGCAAGA
GTTTCTTACTATTGCCACTATTTAAATTCTCTCCTCCATTCAATACACGAAGATAAGACA
AACGTTCAAGGGTATTTCGCTTGGAGTCTGATGGATAATTGGGAATGGGACGACGGCTAT
GCGTCCCGCTTCGGTCTTTACTTGGTCGATTTCAATAGTCCCAACAAGACGAGAACTGCT
AAGGAATCGGCGAAATTGTACACGAGCGTAATATCCTCTCGAGGCCTGCCCGCCGACTAC
GACCCAGAAGATTTCACCGCCTTTTCCAGTGCTTCTCTTCTCGTTCCAACTCTACTCTCA
CTCTTACCCTTTTATAGGCTACTTACATGA
Protein sequence:
MNVRILFKNIDFFIRQAEVLNLAGGAKSNYTFPKDFLFGVSTAAIQIEGAWNEDGKTESI
WDHLVRVNPNFTKDGSTPDVAADSYHLYKRDAEMVHELGVNMYRFSISWPRILPTGLANQ
VNPLGIEYYKNLISELERYNITPMVTIYHWDLPQKLQDIGGWTNAHIIDYYTDYANVLFE
NFADKVKYWITFNEPMQTCLEGYGNTYRAPALNRHGIAEYLCTHNLLKAHASVYHLFNKQ
YRPLYGGKMGMSLDSNWAEPKTDTPRDKKAAELYLKTHLGWYAHPVYSETGNYPEELIKL
VDEKSKKQNYTHSRLPKFTPEEIAYIRGTADFFGLNHYTTYLLSMADSEVGEVPSHANDV
GIVRVQDPKWPSKSSSSWLKVVPFGFRRLLNWITKTYNNVPIIVTENGYADFSGVKDEAR
VSYYCHYLNSLLHSIHEDKTNVQGYFAWSLMDNWEWDDGYASRFGLYLVDFNSPNKTRTA
KESAKLYTSVISSRGLPADYDPEDFTAFSSASLLVPTLLSLLPFYRLLT