New model in OGS2.0 | DPOGS204976  |
---|---|
Genomic Position | scaffold4298:- 1796-2479 |
See gene structure | |
CDS Length | 582 |
Paired RNAseq reads   | 2094 |
Single RNAseq reads   | 6253 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010145 (4e-30) |
Best Drosophila hit   | cuticular protein 92A (3e-23) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein CPR71B [Papilio xuthus] (2e-54) |
Best NR hit (blastx)   | cuticular protein CPR71A [Papilio xuthus] (2e-33) |
GeneOntology terms    | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL10081 |
Nucleotide sequence:
ATGGCTTTCAAGTTGGTCGTTTTAGTTTGCGCTGTTGCTGCCGTGCAAGCTGGGGTGGTC
GCCCCCGTCGCATACTCTGCATACCCGGCGCCGGTCGCATATGCAGCTGCACCAGTCGCG
CACGCTGCTCCGATCGTTCACGCTGCCCCCGTCGCATATGCTGCTCCCGTAGCTAAAGTG
GTAGCTCCGGTCGCTAAAGTCGCCGTCGAAGAATACGACTCCCACCCACGTTACAGTTTC
GCCTACGACGTTCAAGACGGTCTTACCGGTGACTCCAAGAGTCAACAGGAATCCCGTGAC
GGTGACGTCGTACATGGATCCTACTCCGTCATCGACCCTGATGGTACTAAGCGCACTGTG
GAATACACTGCTGATGACCACAATGGTTTCAATGCTGTTGTACACAAAGAGGCTCTCGGT
GTTAAGGCTGTGGCTCCCGTTGCTAAGATCGCTGCCCCAGTAGCGTACGCTGCTGCCCCC
GTAGTACACCATGCCCCATTAGCCTATTCCGCTGCCCCAGTAGTGCACCATTCCCCTCTT
GTGCCAGCCCTAGTCCACTCCGCACCTGTCTACCACCATTAA
Protein sequence:
MAFKLVVLVCAVAAVQAGVVAPVAYSAYPAPVAYAAAPVAHAAPIVHAAPVAYAAPVAKV
VAPVAKVAVEEYDSHPRYSFAYDVQDGLTGDSKSQQESRDGDVVHGSYSVIDPDGTKRTV
EYTADDHNGFNAVVHKEALGVKAVAPVAKIAAPVAYAAAPVVHHAPLAYSAAPVVHHSPL
VPALVHSAPVYHH