New model in OGS2.0 | DPOGS202137  |
---|---|
Genomic Position | scaffold9133:+ 8-3799 |
See gene structure | |
CDS Length | 933 |
Paired RNAseq reads   | 142 |
Single RNAseq reads   | 564 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001510 (4e-100) |
Best Drosophila hit   | Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein, isoform A (4e-65) |
Best Human hit | DENN domain-containing protein 4C (2e-47) |
Best NR hit (blastp)   | AGAP001102-PA [Anopheles gambiae str. PEST] (7e-78) |
Best NR hit (blastx)   | AGAP001102-PA [Anopheles gambiae str. PEST] (8e-74) |
GeneOntology terms    | GO:0005516 calmodulin binding GO:0005085 guanyl-nucleotide exchange factor activity GO:0008105 asymmetric protein localization GO:0005938 cell cortex GO:0070831 basement membrane assembly GO:0055037 recycling endosome |
InterPro families   | IPR005112 dDENN |
Orthology group | ND |
Nucleotide sequence:
ATGGGAAAACATACAGCTTATATTAAAATAAATTATTCCAGGCAGGCGTCTCCGGTAAAT
TCATCTGGTGATAAACACAACGGCGAACCAACTACCAGTTTAGATAGAGATTTCCAGAAG
AGAAAGAAAGAGCAAGCATTGGAGCTTAAAATCCAGGAAGCCTTTCTAAGGTTCATGGCG
GTGACCTTTCAAGGTTATCGTTCATTTCTAATACCTATCACTAAAGCGCCGACCGTGGGT
ACAACAGACCCGCACGCTCTGTTCCATATGGACTCATTTTTGAGATCAAGGGACAAGACC
CACCAGCGTTTCTTCGCTCTGACGATGCGGACACAGATGTTCACTCGTTTCATAGAAGAA
CGTTCGTTCGTATGCGACGCTGATCAAGCCCTGTCCTTCTTCGACGAATGCATAGAGAGA
GTTGCTAGCGAGGAACCCTTACTAGGAATGGACGATAGTAATACATCTGAGAGGACCGTG
TTTGTACTACCTCCGGACCCGCCGGATACCGAACAGCAGTACACGTACAATAAGTTTATA
TTGGACGAGCAGCTGGTATCTCTATGTCATAGTACCCGCGGGTCATTGACCTGCGCCCCC
GCCGCCGCCCTCGCCTCAGTAGAGTCGCTAGCTGACGCCTCACCCATGGCGAGACGAACA
AAACAGGAGATAGCGGCCGCGCAACGATTGGCTCGCAAAGCAAATTTATCTCCGGAGGCG
TGGGCGAAGTGTCTGCTAGGAGCGTGTTACTCGCTATACTTCTTAGCTCTCCCCGGACGA
ATGCTTATATCACGGGGCAAAGAACACGCTACTTTACGTTTTGCGTTCGAGCTACTGGAA
CGAGCTACTAAGCTGAGGGTACCCTGCGATGAGGTAGGAACTAAAAATGTACACTTTAAT
AATTTTAATAACGAATTAATTTCTTATATGTGA
Protein sequence:
MGKHTAYIKINYSRQASPVNSSGDKHNGEPTTSLDRDFQKRKKEQALELKIQEAFLRFMA
VTFQGYRSFLIPITKAPTVGTTDPHALFHMDSFLRSRDKTHQRFFALTMRTQMFTRFIEE
RSFVCDADQALSFFDECIERVASEEPLLGMDDSNTSERTVFVLPPDPPDTEQQYTYNKFI
LDEQLVSLCHSTRGSLTCAPAAALASVESLADASPMARRTKQEIAAAQRLARKANLSPEA
WAKCLLGACYSLYFLALPGRMLISRGKEHATLRFAFELLERATKLRVPCDEVGTKNVHFN
NFNNELISYM