| New model in OGS2.0 | DPOGS202973 |
|---|---|
| Genomic Position | scaffold1838:+ 1535-9072 |
| See gene structure | |
| CDS Length | 882 |
| Paired RNAseq reads | 88 |
| Single RNAseq reads | 303 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011189 (7e-166) |
| Best Drosophila hit | Syt7, isoform E (8e-154) |
| Best Human hit | synaptotagmin-7 (9e-88) |
| Best NR hit (blastp) | PREDICTED: similar to Syt7 CG2381-PG, isoform G [Apis mellifera] (3e-166) |
| Best NR hit (blastx) | PREDICTED: similar to Syt7 CG2381-PG, isoform G [Apis mellifera] (8e-164) |
| GeneOntology terms | GO:0016192 vesicle-mediated transport GO:0005544 calcium-dependent phospholipid binding GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0016079 synaptic vesicle exocytosis GO:0005215 transporter activity GO:0016020 membrane GO:0006810 transport |
| InterPro families | IPR008973 C2 calcium/lipid-binding domain, CaLB IPR000008 C2 calcium-dependent membrane targeting IPR001565 Synaptotagmin IPR020477 C2 region IPR018029 C2 membrane targeting protein |
| Orthology group | MCL15333 |
Nucleotide sequence:
ATGGCGTTCCTACAGAACCGGTCCATCTCGCTGGTGGACATGTACATCGATAATACCGAA
CCGTCGGAGAACGTCGGCCAAATCCACTTCTCTTTGGAATACGACTTCCAGAATACCACT
CTCATCCTCAGGATCATTCAGGGCAAGGAACTGCCGGCTAAAGATCTCAGCGGAACCTCG
GACCCGTATGTCCGGGTTACGCTACTCCCGGATAAAAAACATCGCCTGGAGACCAAGATC
AAACGCAGAACCCTAAATCCTCGATGGAATGAGACCTTCTATTTTGAAGGTTTCCCCATA
CAGAAGTTACAGAGTCGAGTTTTACATCTACACGTGTTCGACTACGATCGCTTCTCTCGG
GATGATTCTATCGGGGAGGTATTCCTGCCTCTATGTCAGGTGGATCTCAGCGAGAAGCCT
TCTTTCTGGAAATCTCTGAAGCCCCCGGCAAAGGACAAATGTGGCGAATTGCTCACATCT
CTCTGCTATCATCCCAGCAACAGCGTTCTTACCCTCACTCTGCTGAAAGCCAGGAACCTG
AAGGCCAAGGACATTAACGGAAAATCGGATCCCTACGTCAAGGTCTGGCTGCAGTTTGGT
GACAAACGCATCGAGAAACGTAAGACAGCTGTCTTCAAGTGTACTTTGAACCCGGTTTTC
AACGATTCATTCTCATTCAACGTGCCCTGGGAGAAGATCAGGGAATGTTCTCTGGACGTT
CAGGTCATGGATTTCGATAACATCGGACGTAATGAACTCATCGGAAGAATATTATTGGCT
GGAAAAAACGGGTCCGGTGCGACAGAGACGAAGCACTGGCAGGATATGATCACGAAGCCA
CGTCAGACGATTGTTCAGTGGCACCGCCTGAAGCCGGAATAA
Protein sequence:
MAFLQNRSISLVDMYIDNTEPSENVGQIHFSLEYDFQNTTLILRIIQGKELPAKDLSGTS
DPYVRVTLLPDKKHRLETKIKRRTLNPRWNETFYFEGFPIQKLQSRVLHLHVFDYDRFSR
DDSIGEVFLPLCQVDLSEKPSFWKSLKPPAKDKCGELLTSLCYHPSNSVLTLTLLKARNL
KAKDINGKSDPYVKVWLQFGDKRIEKRKTAVFKCTLNPVFNDSFSFNVPWEKIRECSLDV
QVMDFDNIGRNELIGRILLAGKNGSGATETKHWQDMITKPRQTIVQWHRLKPE