| New model in OGS2.0 | DPOGS201612 |
|---|---|
| Genomic Position | scaffold4174:+ 3660-7468 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 1241 |
| Single RNAseq reads | 3219 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012202 (2e-151) |
| Best Drosophila hit | chip, isoform A (3e-125) |
| Best Human hit | LIM domain-binding protein 2 isoform a (3e-124) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC000244 [Tribolium castaneum] (2e-157) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000244 [Tribolium castaneum] (2e-143) |
| GeneOntology terms | GO:0003712 transcription cofactor activity GO:0005634 nucleus GO:0007275 multicellular organismal development GO:0019899 enzyme binding |
| InterPro families | IPR002691 LIM binding protein |
| Orthology group | MCL10411 |
Nucleotide sequence:
ATGCCCGTGGCGCTGGGCTCGCTCGGCGAGGGCGAGTACCGGGAGTACCACCACCACTCG
CCTCTTCATCATCAGAACCAGCACCAGCACCAGCCCCAGTACCATGAGTACGGAGCTATA
TACCATCCCATACCGGAGCCCTACTTTAGGAGGCATGCTCCGTACTTCGGACAGCCAGAC
TACAGAGTATATGAACTCAACAAGAGATTACAACAGAGGACCGAGGACTCCGACAACTTG
TGGTGGGATGCCTTCGCCACTGAGTTCTTCGAGGACGACGCGACGCTCACACTGACATTC
TGTTTAGAAGATGGACCCAAGAGATACACAATAGGAAGAACCTTAATACCTCGCTACTTC
CGGAGTATATACGAAGGTGGTGTCTCCGAGCTGTACTACACCATGAGGCAGCCCAAGGAG
TCCTTCCACAACACCAGCATCACGCTGGACTGCGACCACTGCACCATGGTCACCCACCAC
GGCAAGCCCATGTTCACCAAGGTTTGTACGGAGGGCCGCCTCATCCTGGAGTTCACCTTC
GACGACCTGATGCGCATCAAGTCGTGGCACATGGCGGTGAGGGCGCACCGCGAGCTGATA
CCCCGGCAGGCGGTGCACCCCCCCGACCACGCCGCCCTGGACCAGCTGGCCAAGAACATC
ACCCGGCAAGGCATCACCAACTCCACACTCAACTATCTCAGGCTGTGCGTGATCCTGGAG
CCGATGCAGGAGCTGATGTCTCGTCACAAGGCGTACGCGCTCTCCCCCAGAGACTGCCTC
AAGACCACGCTGTTCCAGAAGTGGCAGAGGATGGTCGCCCCGCCCGAGTCCCAGAGGCCG
GCCAGCAAGAGGCGCAAACGTAAAGGCAGCGCCGGAGCCAACGCCGCTCCCCCCGCGCCC
GCCAAGAAGCGGTCCCCCGGACCCAACTTCAGCCTCGCCTCACAGGACGTGATGGTGGTC
GGCGAGCCGTCGCTGATGGGCGGGGAATTCGGCGACGAGGACGAGCGGCTCATCACCAGG
CTGGAGAACACGCAGTACGAGGGCGACGACTGGCCCGCCCCGCCGCCCGCCTCGCCCGCC
AAGACCCCGCCGGCCAACCACTGA
Protein sequence:
MPVALGSLGEGEYREYHHHSPLHHQNQHQHQPQYHEYGAIYHPIPEPYFRRHAPYFGQPD
YRVYELNKRLQQRTEDSDNLWWDAFATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYF
RSIYEGGVSELYYTMRQPKESFHNTSITLDCDHCTMVTHHGKPMFTKVCTEGRLILEFTF
DDLMRIKSWHMAVRAHRELIPRQAVHPPDHAALDQLAKNITRQGITNSTLNYLRLCVILE
PMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPESQRPASKRRKRKGSAGANAAPPAP
AKKRSPGPNFSLASQDVMVVGEPSLMGGEFGDEDERLITRLENTQYEGDDWPAPPPASPA
KTPPANH