DPGLEAN07305 in OGS1.0

New model in OGS2.0DPOGS209553 
Genomic Positionscaffold2393:+ 8658-9826
See gene structure
CDS Length291
Paired RNAseq reads  3
Single RNAseq reads  13
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012445 (3e-27)
Best Drosophila hit  nicotinic acetylcholine receptor alpha 96Aa (1e-18)
Best Human hitND
Best NR hit (blastp)  nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori] (6e-27)
Best NR hit (blastx)  nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori] (7e-26)
GeneOntology terms




  
GO:0005887 integral to plasma membrane
GO:0005892 nicotinic acetylcholine-gated receptor-channel complex
GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity
GO:0016021 integral to membrane
GO:0006811 ion transport
GO:0045211 postsynaptic membrane
InterPro families
  
IPR006202 Neurotransmitter-gated ion-channel ligand-binding
IPR006201 Neurotransmitter-gated ion-channel
Orthology groupMCL21894

Nucleotide sequence:

ATGGTGTTGGCGTTTGTGGTCGGAGTGCTTTGCGTGTGGGGCCGCTTGAGCGTCGCAAAC
CCTGAAGCGAAGCGGCTATACGACGACCTCCTCTCCAACTACAATAGATTGATCCGCCCC
GTCGGCAACAATTCAGATCGACTCACAGTTAAGATGGGTTTAAGGCTTAGTCAGCTCATT
GACGTCATACGATTACATACATACATCATCATCATCATCATCATGATCAGCCTATCGAAG
CCCACTGCTGAGCAAAGGCCTCATCTCACATGGAGAAGGTTAGAGCATTAA

Protein sequence:

MVLAFVVGVLCVWGRLSVANPEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLI
DVIRLHTYIIIIIIMISLSKPTAEQRPHLTWRRLEH