New model in OGS2.0 | DPOGS214757  |
---|---|
Genomic Position | scaffold125:+ 127504-144144 |
See gene structure | |
CDS Length | 2316 |
Paired RNAseq reads   | 106 |
Single RNAseq reads   | 267 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004752 (0.0) |
Best Drosophila hit   | CG14372 (0.0) |
Best Human hit | hemicentin-1 precursor (7e-15) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC009768 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC009768 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR013783 Immunoglobulin-like fold IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013098 Immunoglobulin I-set IPR013162 CD80-like, immunoglobulin C2-set IPR013151 Immunoglobulin IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR008957 Fibronectin type III domain |
Orthology group | MCL11169 |
Nucleotide sequence:
ATGGTTCTCTGGTTTAAGGAATCTGATGGAGAGCCTTTGTACAGTTACGACATCCGAGGT
CGCCTTTATAATCAGCCAAAGCTCTGGTCCTCTCCCCTGGTCTTCGGGAACCGGGCCTAT
TTCCGAGGAGGAGCAACCCCAGCAGTTCTCATGGTCGACAACGTGCTGGCAGTAGACGCT
GGAGTATATAGATGTAGAGTAGACTTTAAAAACTCACCAACTAGAAATTTGAAAGTCAAT
TTCACTGTTATAATTCCACCGAGTCGACCTACTATATACGATGCGAAGAGAAGAGATCGC
ACTAAGTTAGTTGAACCATACAATGAGGGATCAAACGTATTGCTTATTTGTGAAGTTGAA
GGAGGTAGACCACGACCGAAACTGACGTGGTACTTGGAAAACGTTGTCATAGATGATTCC
TATGAACAAAGGGAAGACGGGCTCACTGTGAATACGCTGACGTTCCCAAACGTCGGCAGA
CAACATCTCAATGCAAGGCTTGTTTGCCAAGCGTCCAACACAAATCTGGCGCCGCCTGAG
ACTAAAGTAGTAATTTTGGATATCAACTTGAAACCGATAACGGTAAACATATTAAACAAG
GAGAAGCAAGTATCAGCAGATAAAAGATACGAAGTGGAGTGTAAGACAACAGGATCGCGT
CCCGACGCCTCCGTCACTTGGTGGAAGAACAATAGACAACTCAAACGGATGGCGAAAAAC
TTCTCAGAAAACAACGAAACACTGAGTGTTCTAAGTCTAGTTCCGAGCGTCGAGGATGAT
GGTAAATATTTGACTTGCCGCGCTGAGAACAAACGCATACCAGACTCCGCGATAGAAGAC
AAGTGGAAACTAAATGTGCATTATGTTCCTATAGTAGATCTCAAAATGGGTTCTAATCTA
AACCCTGATGAAATAAAGGAGGGCGACGATGTTTACTTCGAGTGCACTGTCACAGCCAAC
CCCAAGACACATCGACTAGTTTGGTTTCACGATAACAATGAAATCTTTCACAACGAGGGT
TCAGGAGTTATTCTGAGTGCGCAAAGTCTAGTGCTGCAAAGTGTGACACGAGCAGCCGCA
GGAGACTACACCTGCATGGCAGCCAACAGCGAGGGCAAAGGCACAAGCAATCCTGTATCT
TTATTAGTTCGATATGCTCCAGTGTGTTCAGAGAGGAAAGATAATGAACTCTTCGGAGCA
TTGAAACAAGAAACTGTGTCTTTGCATTGTTCAGTCGATGCCAATCCGGCATTAGTGTCT
TTTCATTGGACCTTCAACAACTCTGGAGAACAAACGGAGTTACCACCAAGATTATATAAC
AGTCATGGCCACACGTCCACATTGAATTACACACCGACTACGGACATGGAATATGGCACT
TTGGCTTGTTACGGAGAGAATGCTGTCGGACAGCAGAAGGTCCCTTGCATCTTTCAACTT
GTAGCCGCCGGTCGCCCTTTTCATCTTCAAAACTGCACCGTAGCCAATCAAAGTCTGGAC
TCATTATATGTGGAATGCGTCGAAAATTTCGATGGTGGTCTCCCACAGACATTTCTCATG
GAATTACTGGAACTTCCGTCACTTACTGTAAGATACAATATATCTACAAACCGGACGCCC
CCATACTTCGAGGTTCGTGGTTTGGCTCCCGGCGTTAGCTACAGAATTGATCTTTATGCT
GTTAACGCAAAAGGCAGAAGTGACGTCACTACCATTGAGACTGTAGCGCTGAAGGGACAG
GCCAAGTTTACTGGTGAAAGCAATTCGCTAGGCCTCTCTCCAGTACTCGCCTCAGTAGCG
GCGATGTCAGCGTTATTGGCGATGTCAGTTTGCGGCGTGCTTGCAGTATTGTATAAACGG
CACCTTAACAGACATAGACAACTACCGGCCAAGCACGCGCCTTTGAGTGAAGCTATGTAT
GCTGAAAGAAGTGGTCAGTGTACGACGCCGGTGAAGGCAGAGGTGCGACCGGCGCCGGAA
CCGGACCCAGCTGATGATGCTGACCCTGATATTATACCTAACTTATATGAACGAAGACCG
GTTTCGAATGGCTACATGAGCTTGCAGCGTCCTGGCACAGGCGAGGATGACGCACGTTCT
GAACCTGAAGCTGGTGGTTACTACGCGGATTATAGAAAAAAGGATTATAGGATACCATTG
ACTAATTCGTACCACAGTCTGAACCGCGTGAACAAGGGTGTTACAACAAGAGCGTGCAGT
CCCGCGGCGGCGGGTGTGACGTCATCGCTCACAGCGCACCGTCTGCGCCCGGAGGTAGTC
ACAACTTCCCACCGCGTGCAAGAGAGTTGTATATAA
Protein sequence:
MVLWFKESDGEPLYSYDIRGRLYNQPKLWSSPLVFGNRAYFRGGATPAVLMVDNVLAVDA
GVYRCRVDFKNSPTRNLKVNFTVIIPPSRPTIYDAKRRDRTKLVEPYNEGSNVLLICEVE
GGRPRPKLTWYLENVVIDDSYEQREDGLTVNTLTFPNVGRQHLNARLVCQASNTNLAPPE
TKVVILDINLKPITVNILNKEKQVSADKRYEVECKTTGSRPDASVTWWKNNRQLKRMAKN
FSENNETLSVLSLVPSVEDDGKYLTCRAENKRIPDSAIEDKWKLNVHYVPIVDLKMGSNL
NPDEIKEGDDVYFECTVTANPKTHRLVWFHDNNEIFHNEGSGVILSAQSLVLQSVTRAAA
GDYTCMAANSEGKGTSNPVSLLVRYAPVCSERKDNELFGALKQETVSLHCSVDANPALVS
FHWTFNNSGEQTELPPRLYNSHGHTSTLNYTPTTDMEYGTLACYGENAVGQQKVPCIFQL
VAAGRPFHLQNCTVANQSLDSLYVECVENFDGGLPQTFLMELLELPSLTVRYNISTNRTP
PYFEVRGLAPGVSYRIDLYAVNAKGRSDVTTIETVALKGQAKFTGESNSLGLSPVLASVA
AMSALLAMSVCGVLAVLYKRHLNRHRQLPAKHAPLSEAMYAERSGQCTTPVKAEVRPAPE
PDPADDADPDIIPNLYERRPVSNGYMSLQRPGTGEDDARSEPEAGGYYADYRKKDYRIPL
TNSYHSLNRVNKGVTTRACSPAAAGVTSSLTAHRLRPEVVTTSHRVQESCI